RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 C1QL4Q86Z23 238 aa10.13□□□□□ -0.79
ABCA3-203ENST00000563623 ZDHHC23Q8IYP9 409 aa10.13□□□□□ -0.79
ABCA3-203ENST00000563623 CPEB3Q8NE35 698 aaKnown RBP10.13□□□□□ -0.79
ABCA3-203ENST00000563623 TMEM37Q8WXS4 190 aa10.13□□□□□ -0.79
ABCA3-203ENST00000563623 RNF150Q9ULK6 438 aa10.13□□□□□ -0.79
ABCA3-203ENST00000563623 SPTBN5Q9NRC6 3674 aaKnown RBP10.12□□□□□ -0.79
ABCA3-203ENST00000563623 A0A1W2PPQ1 181 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 CXCL12P48061 93 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 PMP22Q01453 160 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 BAXQ07812 192 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 TRA2AQ13595 282 aaKnown RBP eCLIP10.12□□□□□ -0.79
ABCA3-203ENST00000563623 SLC35E3Q7Z769 313 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 OR2V1Q8NHB1 315 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 VPS25Q9BRG1 176 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 DDA1Q9BW61 102 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 LOC102723971A0A1B0GUV8 181 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 MAP1LC3B2A6NCE7 125 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 SIRPB1O00241 398 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 BCL2P10415 239 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 F2RP25116 425 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 CLDN23Q96B33 292 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 DUSP23Q9BVJ7 150 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 MAP1LC3BQ9GZQ8 125 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 CBLN4Q9NTU7 201 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 TRAPPC2LQ9UL33 140 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 TMEM56-RWDD3S4R434 201 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 PTBP3O95758 552 aaKnown RBP10.12□□□□□ -0.79
ABCA3-203ENST00000563623 ID3Q02535 119 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 SLC25A22Q9H936 323 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 ASCL3Q9NQ33 180 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 SEMA5BQ9P283 1151 aa10.12□□□□□ -0.79
ABCA3-203ENST00000563623 IGHV1-45A0A0A0MS14 117 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 SYNGR2O43760 224 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 NGFP01138 241 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 FGF7P21781 194 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 PLA2G5P39877 138 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 LYSMD4Q5XG99 296 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 NCR3LG1Q68D85 454 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 HIST3H2BBQ8N257 126 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 IFI44Q8TCB0 444 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 CRIM1Q9NZV1 1036 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 H7BYZ3 331 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 TOX3O15405 576 aaPredicted RBP10.11□□□□□ -0.79
ABCA3-203ENST00000563623 UCP1P25874 307 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 EPHA8P29322 1005 aaPredicted RBP10.11□□□□□ -0.79
ABCA3-203ENST00000563623 HBG1P69891 147 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 HBG2P69892 147 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 PLP2Q04941 152 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 HERPUD1Q15011 391 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 ABHD5Q8WTS1 349 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 RNF138Q8WVD3 245 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 PHF7Q9BWX1 381 aaPredicted RBP10.11□□□□□ -0.79
ABCA3-203ENST00000563623 SVILO95425 2214 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 ZNF737O75373 536 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 ZNF66Q6ZN08 573 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 MCEMP1Q8IX19 187 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 SIGLEC12Q96PQ1 595 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 TMEM208Q9BTX3 173 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 SF3B5Q9BWJ5 86 aaKnown RBP10.11□□□□□ -0.79
ABCA3-203ENST00000563623 MTCH1Q9NZJ7 389 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 OR1A1Q9P1Q5 309 aa10.11□□□□□ -0.79
ABCA3-203ENST00000563623 A0A087WWC5 75 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 A0A1B0GW64 132 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 ANKRD30BLA7E2S9 258 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 DEGS1O15121 323 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 CTXN2P0C2S0 81 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 COX6A1P12074 109 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 SSPNQ14714 243 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 NMSQ5H8A3 153 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 MRPL14Q6P1L8 145 aaKnown RBP10.1□□□□□ -0.79
ABCA3-203ENST00000563623 ZNF808Q8N4W9 903 aaPredicted RBP10.1□□□□□ -0.79
ABCA3-203ENST00000563623 AGBL5Q8NDL9 886 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 OR4F5Q8NH21 305 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 OR4F4Q96R69 305 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 RAB40CQ96S21 281 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 AURKAIP1Q9NWT8 199 aaPredicted RBP10.1□□□□□ -0.79
ABCA3-203ENST00000563623 TAAR3PQ9P1P4 343 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 A0A0U1RQK1 487 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 DLEU1O43261 78 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 UMODP07911 640 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 ZXDAP98168 799 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 OR5I1Q13606 314 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 FOXL2NBQ6ZUU3 175 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 RCC1LQ96I51 464 aaKnown RBP10.1□□□□□ -0.79
ABCA3-203ENST00000563623 ADGRG7Q96K78 797 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 WFIKKN1Q96NZ8 548 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 RBKSQ9H477 322 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 PROK2Q9HC23 129 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 ZNF391Q9UJN7 358 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 DOCK10Q96BY6 2186 aa10.1□□□□□ -0.79
ABCA3-203ENST00000563623 CFAP54Q96N23 3096 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 ELOA3CA0A087WX78 387 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 CLEC18AA5D8T8 446 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 FAM166BA8MTA8 275 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 PPP5D1E7EU14 171 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 SIAH2O43255 324 aa10.09□□□□□ -0.79
ABCA3-203ENST00000563623 CYB5R3P00387 301 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-203ENST00000563623 SRD5A2P31213 254 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms