RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 H2BFSP57053 126 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 DAD1P61803 113 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 BIKQ13323 160 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 C4orf26Q17RF5 130 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 HLA-DRB5Q30154 266 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 PYCR3Q53H96 274 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 NXNL2Q5VZ03 156 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 TTC33Q6PID6 262 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 SCGB1D4Q6XE38 83 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 Q6ZRU5 148 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 LYZL2Q7Z4W2 148 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 TMEM144Q7Z5S9 345 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 DAZ4Q86SG3 579 aaKnown RBP0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 MARCH3Q86UD3 253 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 FUNDC1Q8IVP5 155 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 KCTD4Q8WVF5 259 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 ASB13Q8WXK3 278 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR7D2Q96RA2 312 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 TRIB3Q96RU7 358 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 DHRS9Q9BPW9 319 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR2D2Q9H210 308 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 DAZ1Q9NQZ3 744 aaKnown RBP0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 ZNF492Q9P255 531 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 R4GN34 69 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 SPATA31E1Q6ZUB1 1445 aa0.98□□□□□ -2.25
HMGB1P33-201ENST00000563485 ADCY9O60503 1353 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 MYO5BQ9ULV0 1848 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 IGKV1OR2-108A0A075B7D4 117 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 TINCRA0A1B0GVN0 87 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR5H14A6NHG9 310 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 METTL15A6NJ78 407 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 D6RAR5 112 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 F5H768 121 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 COPEO14579 308 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 AZIN1O14977 448 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 BIRC5O15392 142 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 ZW10O43264 779 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 SSNA1O43805 119 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 ADAP1O75689 374 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 DEXIO95424 95 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 IGLV3-27P01718 113 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 IGHV3-53P01767 116 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 APOEP02649 317 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OPN1SWP03999 348 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 FBP1P09467 338 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 LINC00614P0C842 121 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 RD3LP0DJH9 198 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 COX5BP10606 129 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 GADD45AP24522 165 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OPRM1P35372 400 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 IMPG1Q17R60 797 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 TMEM241Q24JQ0 296 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 PDZD11Q5EBL8 140 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 CENPWQ5EE01 88 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 CDKL4Q5MAI5 379 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OGFRL1Q5TC84 451 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 HES3Q5TGS1 186 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 TNFAIP8L2Q6P589 184 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 WDR59Q6PJI9 974 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 FAM19A3Q7Z5A8 133 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 FER1L6-AS1Q8NA97 138 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR4C13Q8NGP0 309 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR9I1Q8NGQ6 314 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR2K2Q8NGT1 345 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR11L1Q8NGX0 322 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 JOSD2Q8TAC2 188 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 PIGXQ8TBF5 258 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 TNFAIP8L1Q8WVP5 186 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OR5P3Q8WZ94 311 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 MAL2Q969L2 176 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 APOBEC3DQ96AK3 386 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 PPCDCQ96CD2 204 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 OPTNQ96CV9 577 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 REEP6Q96HR9 211 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 KCTD7Q96MP8 289 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 LINC01587Q99440 93 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 UPF3BQ9BZI7 483 aaKnown RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 SLC19A3Q9BZV2 496 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 ZNF436Q9C0F3 470 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 EIF5A2Q9GZV4 153 aaKnown RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 ALX4Q9H161 411 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 GTSF1LQ9H1H1 148 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 MS4A6AQ9H2W1 248 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 C11orf49Q9H6J7 331 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 METTL17Q9H7H0 456 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 BABAM2Q9NXR7 383 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 GLS2Q9UI32 602 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 LINC00527Q9UJ94 153 aa0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 ZNF706Q9Y5V0 76 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P33-201ENST00000563485 TRBV24-1A0A075B6N3 115 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 A0A1B0GU33 70 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 SMIM23A6NLE4 172 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 A8MWP4 228 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 LRRN3E7EW58 273 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 C15orf65H3BRN8 121 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 PRB1P04280 392 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 ISG15P05161 165 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 CRYBA1P05813 215 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 IGHV3-30-3P0DP02 117 aa0.96□□□□□ -2.26
HMGB1P33-201ENST00000563485 GABRA1P14867 456 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms