RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 HSPA12AO43301 675 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 PEX14O75381 377 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 MMP23AO75900 390 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 DHFRP00374 187 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 IGKV1-13P0DP09 117 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 CEACAM6P40199 344 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 LOXL3P58215 753 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 GNB2P62879 340 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 TATDN3Q17R31 274 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 CLEC2AQ6UVW9 174 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 ADAD2Q8NCV1 583 aaKnown RBP8.37□□□□□ -1.07
SMG1-208ENST00000563448 TOMM40LQ969M1 308 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 RTBDNQ9BSG5 229 aaPredicted RBP8.37□□□□□ -1.07
SMG1-208ENST00000563448 PARP12Q9H0J9 701 aaKnown RBP8.37□□□□□ -1.07
SMG1-208ENST00000563448 C5orf66Q9H5L9 145 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 LINC00574Q9H8X3 128 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 OR2S2Q9NQN1 319 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 BEX4Q9NWD9 120 aaPredicted RBP8.37□□□□□ -1.07
SMG1-208ENST00000563448 RDH8Q9NYR8 311 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 OR2W1Q9Y3N9 320 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 FAM172BPA6NC97 362 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 ZNF728P0DKX0 622 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 PGAM2P15259 253 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 ECI1P42126 302 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 UCP3P55916 312 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 DLX6P56179 175 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 HERV-K104P61576 105 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 LMO4P61968 165 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 SURF2Q15527 256 aaPredicted RBP8.37□□□□□ -1.07
SMG1-208ENST00000563448 DEFB113Q30KQ7 82 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 UTF1Q5T230 341 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 TMED4Q7Z7H5 227 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 CAPSLQ8WWF8 208 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 ZNF714Q96N38 554 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 SSBP3Q9BWW4 388 aaPredicted RBP8.37□□□□□ -1.07
SMG1-208ENST00000563448 IDI2-AS1Q9NZ38 188 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 RPUSD1Q9UJJ7 312 aaKnown RBP8.37□□□□□ -1.07
SMG1-208ENST00000563448 ZNF221Q9UK13 617 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 ALG5Q9Y673 324 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 C22orf46C9J442 243 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 PI3P19957 117 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 DNASE1P24855 282 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 PPP1CCP36873 323 aaKnown RBP8.36□□□□□ -1.07
SMG1-208ENST00000563448 MORN2Q502X0 79 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 PRAMEF5Q5TYX0 476 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 SLC25A42Q86VD7 318 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 LY6G5BQ8NDX9 201 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 OR10V1Q8NGI7 309 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 C8orf46Q8TAG6 207 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 TMEM230Q96A57 120 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 SCGB3A2Q96PL1 93 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 RSRP1Q9BUV0 290 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 ALX4Q9H161 411 aaPredicted RBP8.36□□□□□ -1.07
SMG1-208ENST00000563448 GAL3ST2Q9H3Q3 398 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 JPT1Q9UK76 154 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 A0A0A6YYJ9 748 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 C7orf66A4D0T2 115 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 KIAA1324LA8MWY0 1029 aaPredicted RBP8.36□□□□□ -1.07
SMG1-208ENST00000563448 YPEL1O60688 119 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 IL5P05113 134 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 CTSDP07339 412 aaPredicted RBP8.36□□□□□ -1.07
SMG1-208ENST00000563448 ZFP36P26651 326 aaKnown RBP8.36□□□□□ -1.07
SMG1-208ENST00000563448 DSCR9P59020 149 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 ESCO2Q56NI9 601 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 GLDNQ6ZMI3 551 aaPredicted RBP8.36□□□□□ -1.07
SMG1-208ENST00000563448 CADM3Q8N126 398 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 LRRC75A-AS1Q8N1F1 130 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 C11orf42Q8N5U0 333 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 OR52B4Q8NGK2 314 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 ZFAND1Q8TCF1 268 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 SECTM1Q8WVN6 248 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 NINJ1Q92982 152 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 YPEL2Q96QA6 119 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 SEC22CQ9BRL7 303 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 GHITMQ9H3K2 345 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 RAB9BQ9NP90 201 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 CCL28Q9NRJ3 127 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 GFOD1Q9NXC2 390 aa8.36□□□□□ -1.07
SMG1-208ENST00000563448 PPIAL4CA0A0B4J2A2 164 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 IGHV4-61A0A0C4DH41 118 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 C17orf98A8MV24 154 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 PRAF2O60831 178 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 TACC2O95359 2948 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 OR4E1P0C645 316 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 PPIAL4GP0DN37 164 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 GNRHRP30968 328 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 BCAP31P51572 246 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 LUMP51884 338 aaPredicted RBP8.35□□□□□ -1.07
SMG1-208ENST00000563448 DHODHQ02127 395 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 PTPN13Q12923 2485 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 CLEC12BQ2HXU8 276 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 HEPN1Q6WQI6 88 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 ZNF818PQ6ZRF7 136 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 SLC38A6Q8IZM9 456 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 OR10A7Q8NGE5 316 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 OR52M1Q8NGK5 317 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 SLC5A7Q9GZV3 580 aa8.35□□□□□ -1.07
SMG1-208ENST00000563448 GNG12Q9UBI6 72 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms