RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TRAT1Q6PIZ9 186 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 C12orf54Q6X4T0 127 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 OR52L2PQ8NGH6 319 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 OR10V1Q8NGI7 309 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 OR10R2Q8NGX6 335 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 CT45A3Q8NHU0 189 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 LGALS14Q8TCE9 139 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 ST6GALNAC6Q969X2 333 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 SLC25A38Q96DW6 304 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 RAB3CQ96E17 227 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 NAA50Q9GZZ1 169 aaKnown RBP6.86□□□□□ -1.31
UBR1-204ENST00000563239 VCX3AQ9NNX9 186 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 ELF5Q9UKW6 265 aaPredicted RBP6.86□□□□□ -1.31
UBR1-204ENST00000563239 TCF19Q9Y242 345 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 MMP24Q9Y5R2 645 aa6.86□□□□□ -1.31
UBR1-204ENST00000563239 IGKV1-6A0A0C4DH72 117 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 A0A1W2PPI3 338 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 BTBD17A6NE02 478 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 FAM90A9PA6NNJ1 464 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 OOSP1A8MZH6 123 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 HIST1H1DP16402 221 aaKnown RBP6.85□□□□□ -1.31
UBR1-204ENST00000563239 GNB3P16520 340 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 PPP1CCP36873 323 aaKnown RBP6.85□□□□□ -1.31
UBR1-204ENST00000563239 KRTAP10-3P60369 221 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 NCS1P62166 190 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 HTD2P86397 168 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 TMEM30BQ3MIR4 351 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 TIMM50Q3ZCQ8 353 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 Q3ZCU0 254 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 MORN2Q502X0 79 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 IDNKQ5T6J7 187 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 SLC25A48Q6ZT89 311 aaKnown RBP6.85□□□□□ -1.31
UBR1-204ENST00000563239 TMEM219Q86XT9 240 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 PRR18Q8N4B5 295 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 CFHR4Q92496 578 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 CREB3L1Q96BA8 519 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 OCSTAMPQ9BR26 566 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 PARP12Q9H0J9 701 aaKnown RBP6.85□□□□□ -1.31
UBR1-204ENST00000563239 ATG5Q9H1Y0 275 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 RIMS4Q9H426 269 aaPredicted RBP6.85□□□□□ -1.31
UBR1-204ENST00000563239 C16orf95Q9H693 158 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 Q9N2K0 584 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 OR2S2Q9NQN1 319 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 KCNIP1Q9NZI2 227 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 VWFP04275 2813 aa6.85□□□□□ -1.31
UBR1-204ENST00000563239 CLPSL1A2RUU4 121 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 TIMM23O14925 209 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 YPEL1O60688 119 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 CRYBA1P05813 215 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 SCTP09683 121 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 CEACAM3P40198 252 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 ZNF137PP52743 207 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 SCAND1P57086 179 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 PROK1P58294 105 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 VBP1P61758 197 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 HLA-DRB3P79483 266 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 ZNF816Q0VGE8 651 aaPredicted RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 MADCAM1Q13477 382 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 HABP2Q14520 560 aaPredicted RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 CTF1Q16619 201 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 LY6G6FQ5SQ64 297 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 STEAP3Q658P3 488 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 DHRS7BQ6IAN0 325 aaPredicted RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 LIAT1Q6ZQX7 453 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 Q6ZS46 218 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 MOB1BQ7L9L4 216 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 ANKRD13BQ86YJ7 626 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 ODF3L1Q8IXM7 274 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 OR10X1Q8NGY0 326 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 OR4F5Q8NH21 305 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 SETD6Q8TBK2 473 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 TOMM40LQ969M1 308 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 GALMQ96C23 342 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 RBMXL1Q96E39 390 aaKnown RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 YPEL2Q96QA6 119 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 CMSS1Q9BQ75 279 aaKnown RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 ZNF747Q9BV97 191 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 MRPS26Q9BYN8 205 aaKnown RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 CHMP1AQ9HD42 196 aaPredicted RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 C12orf4Q9NQ89 552 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.84□□□□□ -1.31
UBR1-204ENST00000563239 ABCB10Q9NRK6 738 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 GNG12Q9UBI6 72 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 JPT1Q9UK76 154 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 SIGLEC9Q9Y336 463 aa6.84□□□□□ -1.31
UBR1-204ENST00000563239 AMMECR1Q9Y4X0 333 aaPredicted RBP6.84□□□□□ -1.31
UBR1-204ENST00000563239 A0A075B6Q4 140 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 IGKV1D-8A0A087WSZ0 117 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 IGHV1-3A0A0C4DH29 117 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 METTL21EPA6NDL7 271 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 TRDCB7Z8K6 153 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 HSD17B6O14756 317 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 SSX5O60225 188 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 GABARAPO95166 117 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 AMY1AP04745 511 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 AMY2AP04746 511 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 FCGR3AP08637 254 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 KIR2DS4P43632 304 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 REG1BP48304 166 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms