RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 U3KQK5 164 aa13.03□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 HUWE1Q7Z6Z7 4374 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 DNAH7Q8WXX0 4024 aa13.02□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 SLC2A2P11168 524 aaPredicted RBP13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ECI1P42126 302 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ADARB1P78563 741 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 TMEM30BQ3MIR4 351 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 C6orf183Q5T699 404 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 C5orf24Q7Z6I8 188 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF485Q8NCK3 441 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MRPS24Q96EL2 167 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 RDH12Q96NR8 316 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 BANF2Q9H503 90 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 SMPD3Q9NY59 655 aaPredicted RBP13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CKLFQ9UBR5 152 aa13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF107Q9UII5 783 aaPredicted RBP13.02□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 TRBV5-7A0A0A0MS05 114 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 A0A1W2PPK0 400 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 LANCL1O43813 399 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 SC5DO75845 299 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MYL12AP19105 171 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MYF6P23409 242 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 PPIFP30405 207 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 KIAA0141Q14154 515 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 GNMTQ14749 295 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MORN2Q502X0 79 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ASPHD1Q5U4P2 390 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 SIGIRRQ6IA17 410 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 LYPD6Q86Y78 171 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF555Q8NEP9 628 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR11H1Q8NG94 326 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 RITA1Q96K30 269 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR14A2Q96R54 314 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 KLK15Q9H2R5 256 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 GNB4Q9HAV0 340 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 EXOSC1Q9Y3B2 195 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 PEX16Q9Y5Y5 336 aa13.01□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 IRGMA1A4Y4 181 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 G3V318 75 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MGMTP16455 207 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CNTFRP26992 372 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MMDQ15546 238 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF260Q3ZCT1 412 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 STEAP3Q658P3 488 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 AWAT2Q6E213 333 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ODF3L1Q8IXM7 274 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 C10orf67Q8IYJ2 551 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ASCL2Q99929 193 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 SELENOIQ9C0D9 397 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 TAF9BQ9HBM6 251 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR2S2Q9NQN1 319 aa13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MBNL3Q9NUK0 354 aaKnown RBP13□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 FAM90A10PA6NDY2 464 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 FAM90A7PA6NKC0 464 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 FAM90A23PA8MXZ1 464 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 I3L521 148 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ATP6V0E1O15342 81 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MAS1P04201 325 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR5H8P0DN80 308 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ACTBP60709 375 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 TRAT1Q6PIZ9 186 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF491Q8N8L2 437 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR52L2PQ8NGH6 319 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 TMEM80Q96HE8 168 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 UBE2E2Q96LR5 201 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 Q96M66 194 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ABHD14AQ9BUJ0 271 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 WSB1Q9Y6I7 421 aa12.99□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 PNMA8CA0A1B0GUJ8 204 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 UBE2QL1A1L167 161 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CA11O75493 328 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 IGLV1-40P01703 118 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 FUT3P21217 361 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 PPP1CCP36873 323 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 GNB1P62873 340 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 DOC2BQ14184 412 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 DERL3Q96Q80 235 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 NABP2Q9BQ15 211 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CHCHD6Q9BRQ6 235 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 MRPL20Q9BYC9 149 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR51J1Q9H342 316 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 JPT1Q9UK76 154 aa12.98□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 RYR2Q92736 4967 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 IGHV7-81A0A0B4J1V7 117 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 HLA-DRB1P01911 266 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 GLAP06280 429 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR8U8P0C7N1 319 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 CAPGP40121 348 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 RUNX1Q01196 453 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR1N2Q8NGR9 330 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 GGHQ92820 318 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 OR5B12Q96R08 314 aa12.97□□□□□ -0.33
VPS9D1-AS1-201ENST00000562298 ANKRD60Q9BZ19 345 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms