RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HABP2Q14520 560 aaPredicted RBP10.84□□□□□ -0.67
CDH1-204ENST00000562118 KRTAP24-1Q3LI83 254 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 YPEL2Q96QA6 119 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 OCSTAMPQ9BR26 566 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 CCDC59Q9P031 241 aaKnown RBP10.84□□□□□ -0.67
CDH1-204ENST00000562118 DPM3Q9P2X0 92 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 ELF5Q9UKW6 265 aaPredicted RBP10.84□□□□□ -0.67
CDH1-204ENST00000562118 ANAPC10Q9UM13 185 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 IGKV1-6A0A0C4DH72 117 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 A0A1W2PRD5 423 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 A0A1W2PRF3 423 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 A0A1W2PRM7 423 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 SDCBPO00560 298 aaPredicted RBP10.83□□□□□ -0.68
CDH1-204ENST00000562118 SSX5O60225 188 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 APOA1P02647 267 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 ZNF134P52741 427 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 PRRX1P54821 245 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 PITPNAQ00169 270 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 HERPUD1Q15011 391 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 LRRC75BQ2VPJ9 315 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 CDNFQ49AH0 187 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 MORN2Q502X0 79 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 FAM53AQ6NSI3 398 aaPredicted RBP10.83□□□□□ -0.68
CDH1-204ENST00000562118 RBMS3Q6XE24 437 aaKnown RBP10.83□□□□□ -0.68
CDH1-204ENST00000562118 C5orf24Q7Z6I8 188 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 OR5R1Q8NH85 324 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 AUNIPQ9H7T9 357 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 KCNIP1Q9NZI2 227 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 FAM96BQ9Y3D0 163 aa10.83□□□□□ -0.68
CDH1-204ENST00000562118 FAM172BPA6NC97 362 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 TMEM235A6NFC5 223 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 FAM90A9PA6NNJ1 464 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 LEUTXA8MZ59 168 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 TRDCB7Z8K6 153 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 TRIM77I1YAP6 450 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 TPPPO94811 219 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 IGHV4-59P01825 116 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 CD3GP09693 182 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 NFYBP25208 207 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 LGALS4P56470 323 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 ZNF816Q0VGE8 651 aaPredicted RBP10.82□□□□□ -0.68
CDH1-204ENST00000562118 GNMTQ14749 295 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 CT45A1Q5HYN5 189 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 TPTE2P1Q5T6R2 138 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 ODF3L1Q8IXM7 274 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 SAMD12Q8N8I0 201 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 OR4A4PQ8NGN8 299 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 CT45A3Q8NHU0 189 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 UBALD1Q8TB05 177 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 AP3S1Q92572 193 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 LEAP2Q969E1 77 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 GALMQ96C23 342 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 AGMATQ9BSE5 352 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 CHIAQ9BZP6 476 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 SLIRPQ9GZT3 109 aaKnown RBP10.82□□□□□ -0.68
CDH1-204ENST00000562118 NXF2Q9GZY0 626 aaKnown RBP10.82□□□□□ -0.68
CDH1-204ENST00000562118 DPAGT1Q9H3H5 408 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 VPREB3Q9UKI3 123 aa10.82□□□□□ -0.68
CDH1-204ENST00000562118 AMMECR1Q9Y4X0 333 aaPredicted RBP10.82□□□□□ -0.68
CDH1-204ENST00000562118 A0A1W2PPI3 338 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 SLC31A2O15432 143 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 EIF4EP06730 217 aaKnown RBP10.81□□□□□ -0.68
CDH1-204ENST00000562118 SCTP09683 121 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 CEACAM3P40198 252 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 KIR2DS4P43632 304 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
CDH1-204ENST00000562118 KIR2DS1Q14954 304 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 CFHR4Q92496 578 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 IFI27L2Q9H2X8 130 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 CHMP1AQ9HD42 196 aaPredicted RBP10.81□□□□□ -0.68
CDH1-204ENST00000562118 OR2S2Q9NQN1 319 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 DIABLOQ9NR28 239 aa10.81□□□□□ -0.68
CDH1-204ENST00000562118 STAB1Q9NY15 2570 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 A0A075B6Q4 140 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 IGKV1D-8A0A087WSZ0 117 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 TRBV6-7A0A0A0MS04 114 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 IGHV3-43A0A0B4J1X8 118 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 TOR1AO14656 332 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 FABP7O15540 132 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 HLA-DQB1P01920 261 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 IGHV3-43DP0DP04 118 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 ELK1P19419 428 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 COMPP49747 757 aaPredicted RBP10.8□□□□□ -0.68
CDH1-204ENST00000562118 MADCAM1Q13477 382 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 SSX2Q16385 188 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 FAM71F2Q6NXP2 309 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 C16orf87Q6PH81 154 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 OR52L2PQ8NGH6 319 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 NUDCD2Q8WVJ2 157 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 TMEM158Q8WZ71 300 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 S100A16Q96FQ6 103 aaKnown RBP10.8□□□□□ -0.68
CDH1-204ENST00000562118 SSX3Q99909 188 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 ABHD14AQ9BUJ0 271 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 MIXL1Q9H2W2 232 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 GNG12Q9UBI6 72 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 ADAM30Q9UKF2 790 aa10.8□□□□□ -0.68
CDH1-204ENST00000562118 TRAV18A0A075B6X5 111 aa10.79□□□□□ -0.68
CDH1-204ENST00000562118 TMEM89A2RUT3 159 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms