RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CYR61O00622 381 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 CA2P00918 260 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 COX19Q49B96 90 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 CD200R1LQ6Q8B3 271 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 ATRAIDQ6UW56 229 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 GAPDHP04406 335 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 FCARP24071 287 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 LIMS1P48059 325 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 TAS2R60P59551 318 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 OR5A2Q8NGI9 324 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 PCED1AQ9H1Q7 454 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 TREM2Q9NZC2 230 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 CES1P1Q9UKY3 287 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 TMSB15BA0A087X1C1 80 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 EML2O95834 649 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 FCGR3AP08637 254 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 APELAP0DMC3 54 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 IL11P20809 199 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 COL19A1Q14993 1142 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 OR4S2Q8NH73 311 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 RPP25Q9BUL9 199 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 RALYQ9UKM9 306 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 GAGE10A6NGK3 116 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 CDIPTO14735 213 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 CXCL10P02778 98 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 UNQ9370/PRO34162Q6UXP9 181 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 REC114Q7Z4M0 266 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 TMEM252Q8N6L7 170 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 GLI3P10071 1580 aa8.91□□□□□ -0.98
GTF3C1-202ENST00000561623 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 HFEQ30201 348 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 DYNLRB2Q8TF09 96 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 IGSF23A1L1A6 192 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 LINC00587B1AMM8 73 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 RPL36A-HNRNPH2H7BZ11 118 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 HAND1O96004 215 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 HSPB1P04792 205 aaKnown RBP8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 RND3P61587 244 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 TNXAQ16473 311 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 GPHA2Q96T91 129 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 GPR132Q9UNW8 380 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 TRGV5A0A0B4J1U4 118 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 A0A1W2PN81 502 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 ISLRO14498 428 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 PIN1P1O15428 100 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 ZNHIT1O43257 154 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 FUT5Q11128 374 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 ISXQ2M1V0 245 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 LHX8Q68G74 356 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 OR8I2Q8N0Y5 310 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 OR52M1Q8NGK5 317 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 ZNF488Q96MN9 340 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 TCFL5Q9UL49 500 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 DSPPQ9NZW4 1301 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 J3KRW8 73 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 K7ESF4 209 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 CD82P27701 267 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 GPR3P46089 330 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 GPBAR1Q8TDU6 330 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 CHST5Q9GZS9 411 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 KIF13BQ9NQT8 1826 aa8.9□□□□□ -0.98
GTF3C1-202ENST00000561623 CASP8AP2Q9UKL3 1982 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 PQLC2LA1A4F0 135 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 HTN1P15515 57 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 MFAP2P55001 183 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 MRPS11P82912 194 aaKnown RBP8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 CXorf66Q5JRM2 361 aaPredicted RBP8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 VAX1Q5SQQ9 334 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 FAM181AQ8N9Y4 354 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 TRBV5-5A0A0J9YX44 114 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 OOEPA6NGQ2 149 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 COX7A1P24310 79 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 LSM6P62312 80 aaKnown RBP8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 RIGQ13278 110 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 OR52L2PQ8NGH6 319 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 OR4X1Q8NH49 305 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 RAB37Q96AX2 223 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 UCN2Q96RP3 112 aa8.9□□□□□ -0.99
GTF3C1-202ENST00000561623 GRIFINA4D1Z8 144 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 PEBP1P30086 187 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 A0A0B4J293 547 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 EIF4E3Q8N5X7 224 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 APCDD1LQ8NCL9 501 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 AQP10Q96PS8 301 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 GAL3ST2Q9H3Q3 398 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 FOCADQ5VW36 1801 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 PTPMT1Q8WUK0 201 aaPredicted RBP8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 PTX4Q96A99 478 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 RPEQ96AT9 228 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 MRPL37Q9BZE1 423 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 MRPL18Q9H0U6 180 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 METTL1Q9UBP6 276 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 IGHV3-21A0A0B4J1V1 117 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 CD1AP06126 327 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 SEBOXQ9HB31 216 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms