RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 GNB3P16520 340 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 RAB6AP20340 208 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 PPP1CCP36873 323 aaKnown RBP11.13□□□□□ -0.63
TPM1-230ENST00000561266 REG1BP48304 166 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 PROK1P58294 105 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 RPL15P61313 204 aaKnown RBP11.13□□□□□ -0.63
TPM1-230ENST00000561266 BLCAPP62952 87 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 MORN2Q502X0 79 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 SLC16A12Q6ZSM3 486 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 SLC25A48Q6ZT89 311 aaKnown RBP11.13□□□□□ -0.63
TPM1-230ENST00000561266 OR56B1Q8NGI3 324 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 OR13F1Q8NGS4 319 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 OR10R2Q8NGX6 335 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 LGALS14Q8TCE9 139 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 Q9N2K0 584 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 TRRAPQ9Y4A5 3859 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 A0A075B6Q4 140 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
TPM1-230ENST00000561266 FAM90A9PA6NNJ1 464 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 MFNGO00587 321 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 TIMM23O14925 209 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 AIREO43918 545 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 SCTP09683 121 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 RPS19P39019 145 aaKnown RBP11.12□□□□□ -0.63
TPM1-230ENST00000561266 ODF3L1Q8IXM7 274 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 DRAM1Q8N682 238 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 OR4F5Q8NH21 305 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 SETD6Q8TBK2 473 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 MAFIPQ8WZ33 124 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 TOMM40LQ969M1 308 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 SLC25A38Q96DW6 304 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 RAB3CQ96E17 227 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 ATG5Q9H1Y0 275 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
TPM1-230ENST00000561266 OR2S2Q9NQN1 319 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 GNG12Q9UBI6 72 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 RNF114Q9Y508 228 aa11.12□□□□□ -0.63
TPM1-230ENST00000561266 IGKV1D-8A0A087WSZ0 117 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 ZNF736B4DX44 427 aaPredicted RBP11.11□□□□□ -0.63
TPM1-230ENST00000561266 H3BUI4 141 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 AMY1AP04745 511 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 AMY2AP04746 511 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 NCS1P62166 190 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 MADCAM1Q13477 382 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 TRAT1Q6PIZ9 186 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 OR10X1Q8NGY0 326 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 OR56B4Q8NH76 319 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 PTX4Q96A99 478 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 RPEQ96AT9 228 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 CMSS1Q9BQ75 279 aaKnown RBP11.11□□□□□ -0.63
TPM1-230ENST00000561266 BEX1Q9HBH7 125 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 OR1A1Q9P1Q5 309 aa11.11□□□□□ -0.63
TPM1-230ENST00000561266 ZNF230Q9UIE0 474 aaPredicted RBP11.11□□□□□ -0.63
TPM1-230ENST00000561266 IGHV1-3A0A0C4DH29 117 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 POM121CA8CG34 1229 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 HAX1O00165 279 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 HSD17B6O14756 317 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 TFAP2AP05549 437 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 SNRNP70P08621 437 aaKnown RBP11.1□□□□□ -0.63
TPM1-230ENST00000561266 CD3GP09693 182 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 HIST1H1DP16402 221 aaKnown RBP11.1□□□□□ -0.63
TPM1-230ENST00000561266 CEACAM3P40198 252 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 KIR2DS4P43632 304 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 HTD2P86397 168 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 ZNF816Q0VGE8 651 aaPredicted RBP11.1□□□□□ -0.63
TPM1-230ENST00000561266 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 ZNF554Q86TJ5 538 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 IL1F10Q8WWZ1 152 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 GALMQ96C23 342 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 JPT1Q9UK76 154 aa11.1□□□□□ -0.63
TPM1-230ENST00000561266 AMMECR1Q9Y4X0 333 aaPredicted RBP11.1□□□□□ -0.63
TPM1-230ENST00000561266 OOSP1A8MZH6 123 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 YPEL1O60688 119 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 FCGR3AP08637 254 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 OR3A3P47888 321 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 ALDH3B2P48448 385 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 ZNF137PP52743 207 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 VBP1P61758 197 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 Q3ZCU0 254 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 CDNFQ49AH0 187 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 IZUMO1Q8IYV9 350 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 Q8N2B8 174 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 CAPSLQ8WWF8 208 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 RTN4IP1Q8WWV3 396 aaPredicted RBP11.09□□□□□ -0.63
TPM1-230ENST00000561266 CREB3L1Q96BA8 519 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 YPEL2Q96QA6 119 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 VCX3AQ9NNX9 186 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 C12orf4Q9NQ89 552 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms