RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 OR3A4PP47883 348 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 ATP1B3P54709 279 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 QRFPP83859 136 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF146Q15072 292 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 TRAM1Q15629 374 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 CARTPTQ16568 116 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 NHLRC3Q5JS37 347 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 Q6P435 159 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 C9orf139Q6ZV77 190 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 FGFRL1Q8N441 504 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 CD177Q8N6Q3 437 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 OR51T1Q8NGJ9 327 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 OR5D18Q8NGL1 313 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 OR11L1Q8NGX0 322 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 RAB1CQ92928 201 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 SLAMF9Q96A28 289 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 RFT1Q96AA3 541 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 TMIGD2Q96BF3 282 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 BORCS8Q96FH0 119 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 CYYR1Q96J86 154 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 C18orf12Q96KH6 178 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 GAFA1Q96PS6 74 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 SMR3AQ99954 134 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 UQCC2Q9BRT2 126 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 OR51E2Q9H255 320 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 RNF167Q9H6Y7 350 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF665Q9H7R5 613 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 HMG20AQ9NP66 347 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 RBFOX1Q9NWB1 397 aaKnown RBP4.87□□□□□ -1.63
LRRC28-220ENST00000561253 TXNL4BQ9NX01 149 aaKnown RBP4.87□□□□□ -1.63
LRRC28-220ENST00000561253 PTTG2Q9NZH5 202 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 IL36GQ9NZH8 169 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF581Q9P0T4 197 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 STUB1Q9UNE7 303 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 POLDIP2Q9Y2S7 368 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 PPIAL4AQ9Y536 164 aa4.87□□□□□ -1.63
LRRC28-220ENST00000561253 IGHV3OR15-7A0A075B7D8 119 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 TRAV38-1A0A0B4J264 116 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 PPIAL4CA0A0B4J2A2 164 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 TEX13DA0A0J9YY54 714 aaPredicted RBP4.86□□□□□ -1.63
LRRC28-220ENST00000561253 A0A1W2PPI3 338 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 RFPL4AA6NLU0 287 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 OR2AT4A6NND4 320 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 RFPL4AL1F8VTS6 287 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 TRAPPC2LH3BP13 241 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 SIGLEC5O15389 551 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 NDUFA2O43678 99 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 GYPAP02724 150 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 CD99P14209 185 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 CD36P16671 472 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 BCL3P20749 454 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 CALRP27797 417 aaKnown RBP4.86□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF93P35789 620 aaPredicted RBP4.86□□□□□ -1.63
LRRC28-220ENST00000561253 POU3F4P49335 361 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 PPP3R1P63098 170 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 UNC119Q13432 240 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 DGUOKQ16854 277 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 HSD17B12Q53GQ0 312 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 DDI2Q5TDH0 399 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 CST9LP1Q5W188 147 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 WDR25Q64LD2 544 aaPredicted RBP4.86□□□□□ -1.63
LRRC28-220ENST00000561253 C22orf42Q6IC83 251 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 C17orf107Q6ZR85 190 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 BIVMQ86UB2 503 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 BATF2Q8N1L9 274 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 SPICQ8N5J4 248 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 FAM216BQ8N7L0 139 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 NKAIN3Q8N8D7 197 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 TMEM104Q8NE00 496 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 DEFB108BQ8NET1 73 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 OR5T2Q8NGG2 359 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 OR51F2Q8NH61 342 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF671Q8TAW3 534 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 TIMD4Q96H15 378 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 CEP19Q96LK0 163 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 CCL13Q99616 98 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 MRPS26Q9BYN8 205 aaKnown RBP4.86□□□□□ -1.63
LRRC28-220ENST00000561253 NAA50Q9GZZ1 169 aaKnown RBP4.86□□□□□ -1.63
LRRC28-220ENST00000561253 SHARPINQ9H0F6 387 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 DNTTIP1Q9H147 329 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 NARFLQ9H6Q4 476 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 RHOFQ9HBH0 211 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 RASL12Q9NYN1 266 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF580Q9UK33 172 aa4.86□□□□□ -1.63
LRRC28-220ENST00000561253 A0A0A6YYD4 124 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 IFITM5A6NNB3 132 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 FOXI3A8MTJ6 420 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-220ENST00000561253 TMEM14DPA8MWL7 114 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 SLC17A2O00624 439 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 PHF1O43189 567 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-220ENST00000561253 CD5LO43866 347 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 ARL6IP5O75915 188 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 NXPH2O95156 264 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 GABARAPO95166 117 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 CDRT1O95170 752 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 LY6G6DO95868 133 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 MAS1P04201 325 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 HCKP08631 526 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 IRF2P14316 349 aa4.85□□□□□ -1.63
LRRC28-220ENST00000561253 GLRA1P23415 457 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms