RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 RAB5BP61020 215 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 UBE2KP61086 200 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 PSME3P61289 254 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 AP1S1P61966 158 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 PPP1CBP62140 327 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 LSM3P62310 102 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 UBE2IP63279 158 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 ADARB1P78563 741 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 LCN2P80188 198 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 TFAMQ00059 246 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 GLO1Q04760 184 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 GRK1Q15835 563 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 ZNF404Q494X3 552 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 Q5BKY6 102 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 CDKL4Q5MAI5 379 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 RBM48Q5RL73 367 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 TMEM236Q5W0B7 351 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 ELP2Q6IA86 826 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 ADNP2Q6IQ32 1131 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SLC25A25Q6KCM7 469 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 RPL13AP3Q6NVV1 102 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 GUSBP11Q6P575 273 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 HAGHLQ6PII5 290 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 C12orf54Q6X4T0 127 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 Q6ZSR3 168 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 RASSF6Q6ZTQ3 369 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 COPS6Q7L5N1 327 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 GALNT10Q86SR1 603 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 TAC4Q86UU9 113 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 CMTM1Q8IZ96 169 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 C8orf59Q8N0T1 100 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 CBR4Q8N4T8 237 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 C12orf45Q8N5I9 185 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 ATPAF2Q8N5M1 289 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 YIPF7Q8N8F6 280 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 GDPD1Q8N9F7 314 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 FBXO36Q8NEA4 188 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 OR4M2Q8NGB6 313 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 OR2A1Q8NGT9 310 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 PHOSPHO2Q8TCD6 241 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 ZNF431Q8TF32 576 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 DCAKDQ8WVC6 231 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 C1orf54Q8WWF1 131 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 RAB1CQ92928 201 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 CPNE4Q96A23 557 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 EEF1AKMT3Q96AZ1 226 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 MRPL48Q96GC5 212 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 HYLS1Q96M11 299 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 Q96MT0 163 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 RNF145Q96MT1 663 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 LINC00052Q96N35 136 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 IP6K3Q96PC2 410 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 CSPG4P5Q96PW8 444 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 TRNT1Q96Q11 434 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 PFDN5Q99471 154 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 MICU1Q9BPX6 476 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 LXNQ9BS40 222 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 MED18Q9BUE0 208 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 PRRG3Q9BZD7 231 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 TM6SF2Q9BZW4 377 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SLC22A4Q9H015 551 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 ALX4Q9H161 411 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 METTL9Q9H1A3 318 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 DCSTAMPQ9H295 470 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 GAL3ST2Q9H3Q3 398 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 C11orf49Q9H6J7 331 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 TREM1Q9NP99 234 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 XPNPEP1Q9NQW7 623 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 C19orf12Q9NSK7 152 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SDHAF2Q9NX18 166 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 BABAM2Q9NXR7 383 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 USE1Q9NZ43 259 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 ADA2Q9NZK5 511 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 MED11Q9P086 117 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SLC17A7Q9P2U7 560 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 UXTQ9UBK9 157 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 CLN8Q9UBY8 286 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 CD300AQ9UGN4 299 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 FBXO5Q9UKT4 447 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SCML1Q9UN30 329 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SSR3Q9UNL2 185 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 TPRKBQ9Y3C4 175 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SAMHD1Q9Y3Z3 626 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 POLR3HQ9Y535 204 aaPredicted RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 ALG5Q9Y673 324 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SLC22A7Q9Y694 548 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 PSME4Q14997 1843 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 KIF20BQ96Q89 1820 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 MYH6P13533 1939 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 FLT4P35916 1363 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 PALLDQ8WX93 1383 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 SYNE2Q8WXH0 6885 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 ADGRB1O14514 1584 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 DIP2CQ9Y2E4 1556 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 KIAA0100Q14667 2235 aaKnown RBP1.16□□□□□ -2.22
USP8-216ENST00000561206 KIDINS220Q9ULH0 1771 aa1.16□□□□□ -2.22
USP8-216ENST00000561206 DCCP43146 1447 aa1.15□□□□□ -2.22
USP8-216ENST00000561206 EDC4Q6P2E9 1401 aaKnown RBP1.15□□□□□ -2.22
USP8-216ENST00000561206 TRPM2O94759 1503 aa1.15□□□□□ -2.22
USP8-216ENST00000561206 NFAT5O94916 1531 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms