RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 TMEM59Q9BXS4 323 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 TAF9BQ9HBM6 251 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 ACOT13Q9NPJ3 140 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 LINC00527Q9UJ94 153 aa10.03□□□□□ -0.8
CHRNA3-208ENST00000561128 A0A0B4J203 849 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 SMIM30A4D0T7 59 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 SNRPBP14678 240 aaKnown RBP10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 RAB7AP51149 207 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 ZNF137PP52743 207 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 HES1Q14469 280 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 HMGN3Q15651 99 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 GLT8D1Q68CQ7 371 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 SLC16A12Q6ZSM3 486 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 MOB3BQ86TA1 216 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 NR2C2APQ86WQ0 139 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 NDUFA11Q86Y39 141 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 IZUMO1Q8IYV9 350 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 OR8H3Q8N146 312 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 SVOPQ8N4V2 548 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 OR6M1Q8NGM8 313 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 THRSPQ92748 146 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 CREB3L1Q96BA8 519 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 EAF1Q96JC9 268 aaPredicted RBP10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 SPACA1Q9HBV2 294 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 ISYNA1Q9NPH2 558 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 GNG12Q9UBI6 72 aa10.02□□□□□ -0.81
CHRNA3-208ENST00000561128 PLXNB1O43157 2135 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 SLC17A2O00624 439 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 BPNT1O95861 308 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 NAPSAO96009 420 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 CALRP27797 417 aaKnown RBP10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 EBI3Q14213 229 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 OXLD1Q5BKU9 147 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 C6orf183Q5T699 404 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 ZNF880Q6PDB4 577 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 ZNF329Q86UD4 541 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 C8orf31Q8N9H6 132 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 Q8N9W7 124 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 OR51D1Q8NGF3 324 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 HSPB9Q9BQS6 159 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 MRPL20Q9BYC9 149 aaKnown RBP10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 CST11Q9H112 138 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 PLSCR3Q9NRY6 295 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 GHRLQ9UBU3 117 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 AK3Q9UIJ7 227 aa10.01□□□□□ -0.81
CHRNA3-208ENST00000561128 LDLRAD4O15165 306 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 SPINT2O43291 252 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 UBBP0CG47 229 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 FAM106CPP0CH98 169 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 CNTFRP26992 372 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 BLVRBP30043 206 aaPredicted RBP10□□□□□ -0.81
CHRNA3-208ENST00000561128 OR3A3P47888 321 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 HSPA13P48723 471 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 ARHGDIBP52566 201 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 TMEM50BP56557 158 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 EMX1Q04741 257 aaPredicted RBP10□□□□□ -0.81
CHRNA3-208ENST00000561128 MOGAT2Q3SYC2 334 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 MORN2Q502X0 79 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 PLAC9Q5JTB6 97 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 HES5Q5TA89 166 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 ETV3LQ6ZN32 361 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 LCNL1Q6ZST4 164 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 ZNF367Q7RTV3 350 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 RITA1Q96K30 269 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 IFI27L2Q9H2X8 130 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 OR1A1Q9P1Q5 309 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 RAB26Q9ULW5 256 aa10□□□□□ -0.81
CHRNA3-208ENST00000561128 TMEM272A0A1B0GTI8 110 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 GAPDHP04406 335 aaKnown RBP9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 GLAP06280 429 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 F2RL1P55085 397 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 LSAMPQ13449 338 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 RAB11BQ15907 218 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 KPRPQ5T749 579 aaPredicted RBP9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 CD200R1LQ6Q8B3 271 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 FAM89BQ8N5H3 189 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 KCNG3Q8TAE7 436 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 AKR1E2Q96JD6 320 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 NEDD4LQ96PU5 975 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 ABHD14AQ9BUJ0 271 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 VCX3BQ9H321 246 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 PLGRKTQ9HBL7 147 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 OR2S2Q9NQN1 319 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 NDUFB11Q9NX14 153 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 KCNK7Q9Y2U2 307 aa9.99□□□□□ -0.81
CHRNA3-208ENST00000561128 SAA2-SAA4A0A096LPE2 208 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 IGKV1-6A0A0C4DH72 117 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 ST8SIA5O15466 376 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 PEX14O75381 377 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 CA11O75493 328 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 SAA2P0DJI9 122 aaPredicted RBP9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 Q3ZCU0 254 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 OR2W3Q7Z3T1 314 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 CENPVQ7Z7K6 275 aaPredicted RBP9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 SPARTQ8N0X7 666 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms