RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 ZNF506Q5JVG8 444 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 FAM209BQ5JX69 171 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 Q5PR19 223 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 RIPPLY2Q5TAB7 128 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 CARD17Q5XLA6 110 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TMEM211Q6ICI0 200 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SLC22A25Q6T423 547 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 DPPA3Q6W0C5 159 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 FBXW12Q6X9E4 464 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 MEX3BQ6ZN04 569 aaKnown RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 SHISA6Q6ZSJ9 500 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SLC16A13Q7RTY0 426 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 GALNTL5Q7Z4T8 443 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 LYZL2Q7Z4W2 148 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 CPEB2Q7Z5Q1 589 aaKnown RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 ODF3L1Q8IXM7 274 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 C20orf196Q8IYI0 205 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SAXO1Q8IYX7 474 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 OSR2Q8N2R0 312 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 LINC00469Q8N7U9 141 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SLC35G3Q8N808 338 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 C11orf44Q8N8P7 122 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 ZIC4Q8N9L1 334 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 WDSUB1Q8N9V3 476 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 OR10AD1Q8NGE0 317 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 OR52M1Q8NGK5 317 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 OR10G4Q8NGN3 311 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 OR13D1Q8NGV5 346 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 OR14L1PQ8NHC6 308 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 NANPQ8TBE9 248 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 NPRL2Q8WTW4 380 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TCTEX1D2Q8WW35 142 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 RTN4IP1Q8WWV3 396 aaPredicted RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 RLN3Q8WXF3 142 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TOMM40LQ969M1 308 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SPTSSAQ969W0 71 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SPSB4Q96A44 273 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 ISOC2Q96AB3 205 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 INTS12Q96CB8 462 aaKnown RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 FBXO17Q96EF6 278 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 REEP6Q96HR9 211 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TMEM56Q96MV1 263 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 IP6K3Q96PC2 410 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TECTBQ96PL2 329 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 ZNF385AQ96PM9 386 aaKnown RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 SIGLEC12Q96PQ1 595 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TP53RKQ96S44 253 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 S100A13Q99584 98 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SPIN2AQ99865 258 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SPIN2BQ9BPZ2 258 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 CABLES2Q9BTV7 478 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 ST6GALNAC5Q9BVH7 336 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 PARD6GQ9BYG4 376 aaPredicted RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 ULBP2Q9BZM5 246 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TMEM222Q9H0R3 208 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 METTL9Q9H1A3 318 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SLC35B3Q9H1N7 401 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SH3BGRL3Q9H299 93 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 WDR54Q9H977 334 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SPACA1Q9HBV2 294 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 PROK2Q9HC23 129 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SDF2L1Q9HCN8 221 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 SIRT7Q9NRC8 400 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 GSN-AS1Q9NRJ2 163 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 GLRX2Q9NS18 164 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 GPR173Q9NS66 373 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 LYRM2Q9NU23 88 aaPredicted RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 TMEM38BQ9NVV0 291 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 PLEKHJ1Q9NW61 149 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 PLEK2Q9NYT0 353 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 GSKIPQ9P0R6 139 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 ZNF581Q9P0T4 197 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 C19orf25Q9UFG5 118 aaPredicted RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 TINAGQ9UJW2 476 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 NXT1Q9UKK6 140 aaKnown RBP2.08□□□□□ -2.08
SPG11-223ENST00000560858 RARRES3Q9UL19 164 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 PIGLQ9Y2B2 252 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 KCNIP3Q9Y2W7 256 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TMEM56-RWDD3S4R434 201 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 ARID1AO14497 2285 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 TANC2Q9HCD6 1990 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 REV3LO60673 3130 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 DOCK7Q96N67 2140 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 FREM1Q5H8C1 2179 aa2.08□□□□□ -2.08
SPG11-223ENST00000560858 C5orf42Q9H799 3197 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 HCFC1P51610 2035 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 DSCAML1Q8TD84 2053 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 IGHV1-45A0A0A0MS14 117 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PIGBOS1A0A0B4J2F0 54 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 A0A0J9YW62 118 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 IGHV5-10-1A0A0J9YXX1 117 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF816-ZNF321PA0A0X1KG74 233 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 LOC102723971A0A1B0GUV8 181 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FAM230AA0A1W2PPH8 454 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 A0A1W2PQM1 296 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 NKX2-6A6NCS4 301 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 CXorf65A6NEN9 183 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 RBFOX3A6NFN3 312 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF729A6NN14 1252 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF724A8MTY0 619 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms