RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 PTGDSP41222 190 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 KIR2DS4P43632 304 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 KIR2DS1Q14954 304 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 YAF2Q8IY57 180 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 TMEM9BQ9NQ34 198 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 CHD3Q12873 2000 aaKnown RBP13.69□□□□□ -0.22
PBX1-219ENST00000560641 IGHV5-51A0A0C4DH38 117 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 SERPINA7P05543 415 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 MPLP40238 635 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 ATP6V1FQ16864 119 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 RIPPLY2Q5TAB7 128 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 TMEM14EPQ6UXP3 125 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.69□□□□□ -0.22
PBX1-219ENST00000560641 PSENENQ9NZ42 101 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 SHANK1Q9Y566 2161 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 ARID1AO14497 2285 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 IFNL4K9M1U5 179 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 PDE6DO43924 150 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 LHX2P50458 406 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 CLDN15P56746 228 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 KIAA2026Q5HYC2 2103 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 C12orf76Q8N812 135 aaPredicted RBP13.69□□□□□ -0.22
PBX1-219ENST00000560641 OR2D3Q8NGH3 330 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.69□□□□□ -0.22
PBX1-219ENST00000560641 WIPI2Q9Y4P8 454 aa13.69□□□□□ -0.22
PBX1-219ENST00000560641 NPIPB11E5RHQ5 1161 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 PDGFBP01127 241 aaPredicted RBP13.68□□□□□ -0.22
PBX1-219ENST00000560641 CHRNB4P30926 498 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 CARD17Q5XLA6 110 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 SAXO1Q8IYX7 474 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 Q8N976 141 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 REG1AP05451 166 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 SPIN3Q5JUX0 258 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 FAM27BQ5VT28 67 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 OR4C12Q96R67 309 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 ATP23Q9Y6H3 246 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 SAA2-SAA4A0A096LPE2 208 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 SLC33A1O00400 549 aaPredicted RBP13.68□□□□□ -0.22
PBX1-219ENST00000560641 SYNGR3O43761 229 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 NDUFB8O95169 186 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 NRASP01111 189 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 JMJD7P0C870 316 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 S100GP29377 79 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 ADMP35318 185 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 GUCA1AP43080 201 aaPredicted RBP13.68□□□□□ -0.22
PBX1-219ENST00000560641 KIAA0895LQ68EN5 471 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 LEMD1Q68G75 181 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 C17orf82Q86X59 251 aaPredicted RBP13.68□□□□□ -0.22
PBX1-219ENST00000560641 C11orf42Q8N5U0 333 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 NFAM1Q8NET5 270 aaPredicted RBP13.68□□□□□ -0.22
PBX1-219ENST00000560641 DEFB118Q96PH6 123 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 TXNDC17Q9BRA2 123 aa13.68□□□□□ -0.22
PBX1-219ENST00000560641 TRBV11-1A0A0K0K1C0 115 aa13.67□□□□□ -0.22
PBX1-219ENST00000560641 ACRP10323 421 aa13.67□□□□□ -0.22
PBX1-219ENST00000560641 FBLP22087 321 aaKnown RBP13.67□□□□□ -0.22
PBX1-219ENST00000560641 TRA2AQ13595 282 aaKnown RBP eCLIP13.67□□□□□ -0.22
PBX1-219ENST00000560641 TRIP6Q15654 476 aaKnown RBP13.67□□□□□ -0.22
PBX1-219ENST00000560641 VWC2Q2TAL6 325 aa13.67□□□□□ -0.22
PBX1-219ENST00000560641 TDRG1Q3Y452 100 aa13.67□□□□□ -0.22
PBX1-219ENST00000560641 FAM78BQ5VT40 261 aa13.67□□□□□ -0.22
PBX1-219ENST00000560641 CCL28Q9NRJ3 127 aa13.67□□□□□ -0.22
PBX1-219ENST00000560641 EXTL1Q92935 676 aa13.67□□□□□ -0.22
PBX1-219ENST00000560641 ADAMTS20P59510 1910 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 TCF21O43680 179 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 NPPCP23582 126 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 OR1D5P58170 312 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 PHYHD1Q5SRE7 291 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 ACSM6Q6P461 480 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 BRICD5Q6PL45 260 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 PCSK4Q6UW60 755 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 OR4F5Q8NH21 305 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 OR4F4Q96R69 305 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 RNF2Q99496 336 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 ZNF442Q9H7R0 627 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 DOCK8Q8NF50 2099 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 PDE4DIPQ5VU43 2346 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 IGKV1-6A0A0C4DH72 117 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 A0A0U1RQK1 487 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 hCG_38984A0A1B0GV85 526 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 ZNF320A2RRD8 509 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 CCR5P51681 352 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 Q6ZRM9 215 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 IL23AQ9NPF7 189 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 SOHLH2Q9NX45 425 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 C20orf202A1L168 122 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 F6UZH7 168 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 KRASP01116 189 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 PPBPP02775 128 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 BLKP51451 505 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 RPS20P60866 119 aaKnown RBP13.66□□□□□ -0.22
PBX1-219ENST00000560641 ZNF324BQ6AW86 544 aaPredicted RBP13.66□□□□□ -0.22
PBX1-219ENST00000560641 FADS6Q8N9I5 356 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 RAB1CQ92928 201 aa13.66□□□□□ -0.22
PBX1-219ENST00000560641 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
PBX1-219ENST00000560641 DHHO43323 396 aa13.65□□□□□ -0.22
PBX1-219ENST00000560641 IGHV4-34P06331 123 aa13.65□□□□□ -0.22
PBX1-219ENST00000560641 RPS18P62269 152 aaKnown RBP13.65□□□□□ -0.22
PBX1-219ENST00000560641 OR2M3Q8NG83 312 aa13.65□□□□□ -0.22
PBX1-219ENST00000560641 OR5AU1Q8NGC0 362 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms