RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TRDV1A0A1B0GX56 115 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 A0A1W2PPI3 338 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 OR2F2O95006 317 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 CD37P11049 281 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 OR10A3P58181 314 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 MRPS15P82914 257 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 QRFPP83859 136 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 NEDD8Q15843 81 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 C2orf68Q2NKX9 166 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 TMEM95Q3KNT9 176 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 HIST2H2BDQ6DRA6 164 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 CD200R1LQ6Q8B3 271 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 GAPTQ8N292 157 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 OR52L2PQ8NGH6 319 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 GALMQ96C23 342 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 SSR3Q9UNL2 185 aa10.38□□□□□ -0.75
CTDSPL2-209ENST00000560620 A0A0A6YYD4 124 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 IGHV1-3A0A0C4DH29 117 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 SMIM30A4D0T7 59 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 SH2D7A6NKC9 451 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 M0QZK8 103 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 SLC31A2O15432 143 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 RGS11O94810 467 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 IGKV1D-33P01593 117 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 IGKV1-33P01594 117 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 GALP22466 123 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 PPP1CCP36873 323 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 TET2Q6N021 2002 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 Q6ZS46 218 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 C5orf24Q7Z6I8 188 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 TGIF2LXQ8IUE1 241 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 LYG1Q8N1E2 194 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 Q8N2B8 174 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 LINC00311Q8N616 119 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 C8orf31Q8N9H6 132 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 OR56B1Q8NGI3 324 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 SERTAD4Q9NUC0 356 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 AK3Q9UIJ7 227 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 JPT1Q9UK76 154 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 MOB4Q9Y3A3 225 aa10.37□□□□□ -0.75
CTDSPL2-209ENST00000560620 TMEM272A0A1B0GTI8 110 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 IFITM5A6NNB3 132 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 NCBP2LA6PVI3 153 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 FBXO24O75426 580 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 CSF1P09603 554 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 ZNF816Q0VGE8 651 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 GNMTQ14749 295 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 Q3ZCU0 254 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 MORN2Q502X0 79 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 FBLN7Q53RD9 439 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 CT45A1Q5HYN5 189 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 SLC25A48Q6ZT89 311 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 MOB1BQ7L9L4 216 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 CENPVQ7Z7K6 275 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 THNSL2Q86YJ6 484 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 CT45A3Q8NHU0 189 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 FAM110DQ8TAY7 271 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 RTN4IP1Q8WWV3 396 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 CFHR4Q92496 578 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 ARHGAP5-AS1Q96IT6 56 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 HDHD3Q9BSH5 251 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 RIMS4Q9H426 269 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 C12orf4Q9NQ89 552 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 TXNL4BQ9NX01 149 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 RAB22AQ9UL26 194 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 NBEAL1Q6ZS30 2694 aa10.36□□□□□ -0.75
CTDSPL2-209ENST00000560620 A0A075B6Q4 140 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 LOC100506127A0A0U1RQW1 187 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 SHISA3A0PJX4 238 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 HSPA12AO43301 675 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 TXNL1O43396 289 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 TSPAN15O95858 294 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 GADD45AP24522 165 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 ZNF134P52741 427 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 HTD2P86397 168 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 HMGN3Q15651 99 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 FAM89BQ8N5H3 189 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 OR2AK2Q8NG84 335 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 CMSS1Q9BQ75 279 aaKnown RBP10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 CHCHD6Q9BRQ6 235 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 ABHD14AQ9BUJ0 271 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 PECRQ9BY49 303 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 MMP27Q9H306 513 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 HSF4Q9ULV5 492 aa10.35□□□□□ -0.75
CTDSPL2-209ENST00000560620 A0A0B4J203 849 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 METTL21EPA6NDL7 271 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 FAM90A9PA6NNJ1 464 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 NAPSAO96009 420 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 CD3GP09693 182 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 CD28P10747 220 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 SLC2A2P11168 524 aaPredicted RBP10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 FGF9P31371 208 aaPredicted RBP10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 PLA2G7Q13093 441 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 STEAP3Q658P3 488 aa10.34□□□□□ -0.75
CTDSPL2-209ENST00000560620 ZNF439Q8NDP4 499 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms