RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 MALSU1Q96EH3 234 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 SSX3Q99909 188 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 BCL7BQ9BQE9 202 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 CHIAQ9BZP6 476 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 MEGF9Q9H1U4 602 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 OR2S2Q9NQN1 319 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
LYSMD2-204ENST00000560491 H3BUX3 64 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 CLDN34H7C241 214 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 EIF4EP06730 217 aaKnown RBP12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 RNASE1P07998 156 aaKnown RBP12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 GSTP1P09211 210 aaKnown RBP12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 SCTP09683 121 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 ZNF182P17025 639 aaPredicted RBP12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 PPP1CCP36873 323 aaKnown RBP12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 HTD2P86397 168 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 ARL6IP1Q15041 203 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 LRRC75BQ2VPJ9 315 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 KRTAP21-3Q3LHN1 58 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 TMEM30BQ3MIR4 351 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 HACD4Q5VWC8 232 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 ZNF439Q8NDP4 499 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 GALMQ96C23 342 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 ABCG5Q9H222 651 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 POMT1Q9Y6A1 747 aa12.53□□□□□ -0.4
LYSMD2-204ENST00000560491 A0A0A6YYH2 397 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 CCDC160A6NGH7 325 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 A6NJ64 397 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 RNF212BA8MTL3 300 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 LY6LH3BQJ8 138 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 SSX5O60225 188 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 HPGDSO60760 199 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 PTHLHP12272 177 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 TALDO1P37837 337 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 RAB13P51153 203 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 ZNF134P52741 427 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 GNG2P59768 71 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 DIAPH2-AS1Q14236 149 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 LY6EQ16553 131 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 MORN2Q502X0 79 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 TPTE2P1Q5T6R2 138 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 TMEM86BQ8N661 226 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 OR10X1Q8NGY0 326 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 ACOT12Q8WYK0 555 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 TAF15Q92804 592 aaKnown RBP eCLIP12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 S100A16Q96FQ6 103 aaKnown RBP12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 MDFIQ99750 246 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 DPAGT1Q9H3H5 408 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 DIABLOQ9NR28 239 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 MGAT4AQ9UM21 535 aa12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 AMMECR1Q9Y4X0 333 aaPredicted RBP12.52□□□□□ -0.41
LYSMD2-204ENST00000560491 ATRQ13535 2644 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 IGKV1D-8A0A087WSZ0 117 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 IGKV1-6A0A0C4DH72 117 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 POM121CA8CG34 1229 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 TRDCB7Z8K6 153 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 XRCC3O43542 346 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 HERPUD1Q15011 391 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 CT45A1Q5HYN5 189 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 LINC00311Q8N616 119 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 CT45A3Q8NHU0 189 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 PIFOQ8TCI5 191 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 DYNC2LI1Q8TCX1 351 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 FAM216AQ8WUB2 273 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 AP3S1Q92572 193 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 C19orf24Q9BVV8 132 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 PARP12Q9H0J9 701 aaKnown RBP12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 RBM38Q9H0Z9 239 aaKnown RBP12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 AUNIPQ9H7T9 357 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 SLC23A1Q9UHI7 598 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 VPREB3Q9UKI3 123 aa12.51□□□□□ -0.41
LYSMD2-204ENST00000560491 BTBD17A6NE02 478 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 VGLL3A8MV65 326 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 FABP7O15540 132 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 YPEL1O60688 119 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 APOA1P02647 267 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 GSTT2P0CG29 244 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 GSTT2BP0CG30 244 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 ELK1P19419 428 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 DTYMKP23919 212 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 SOX6P35712 828 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 CEACAM3P40198 252 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 MADCAM1Q13477 382 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 PNLIPRP3Q17RR3 467 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 Q3ZCU0 254 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 TMEM69Q5SWH9 247 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 STEAP3Q658P3 488 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 MZT2AQ6P582 158 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 SLC25A48Q6ZT89 311 aaKnown RBP12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 C8orf31Q8N9H6 132 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 OR5R1Q8NH85 324 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 ZFAND2BQ8WV99 257 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 TMEM158Q8WZ71 300 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 TOMM40LQ969M1 308 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 RPEQ96AT9 228 aa12.5□□□□□ -0.41
LYSMD2-204ENST00000560491 CREB3L1Q96BA8 519 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms