RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ARHGDIBP52566 201 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 DEFA5Q01523 94 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 CATR1Q13166 79 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 SRSF6Q13247 344 aaKnown RBP8.18□□□□□ -1.1
RTF1-206ENST00000560447 PEA15Q15121 130 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 MIDNQ504T8 468 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 STX12Q86Y82 276 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 C11orf53Q8IXP5 236 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 TMEM252Q8N6L7 170 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 ZNF645Q8N7E2 425 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 ZNF610Q8N9Z0 462 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 GALMQ96C23 342 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 PBDC1Q9BVG4 233 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 PARD6GQ9BYG4 376 aaPredicted RBP8.18□□□□□ -1.1
RTF1-206ENST00000560447 TREM1Q9NP99 234 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 CACFD1Q9UGQ2 172 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 RNF150Q9ULK6 438 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 RNF115Q9Y4L5 304 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 CHD3Q12873 2000 aaKnown RBP8.18□□□□□ -1.1
RTF1-206ENST00000560447 A0A1W2PR80 420 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 IGSF23A1L1A6 192 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 K7N7A8 449 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 DNASE2O00115 360 aaPredicted RBP8.17□□□□□ -1.1
RTF1-206ENST00000560447 IGHV3-13P01766 116 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 GRPP07492 148 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 ADH4P08319 380 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 H2AFB1P0C5Y9 115 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 CEACAM8P31997 349 aaPredicted RBP8.17□□□□□ -1.1
RTF1-206ENST00000560447 GLRXP35754 106 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 CAMLGP49069 296 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 ERVS71-1P61550 626 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 POLR2GP62487 172 aaKnown RBP eCLIP8.17□□□□□ -1.1
RTF1-206ENST00000560447 HTD2P86397 168 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 ALKBH6Q3KRA9 238 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 C4orf17Q53FE4 359 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 DHRS7BQ6IAN0 325 aaPredicted RBP8.17□□□□□ -1.1
RTF1-206ENST00000560447 WDR82Q6UXN9 313 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 ZNF66Q6ZN08 573 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 PRSS33Q8NF86 280 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 GPR146Q96CH1 333 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 HRH4Q9H3N8 390 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 WFDC1Q9HC57 220 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 C19orf12Q9NSK7 152 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 TINAGQ9UJW2 476 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 WASF3Q9UPY6 502 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 RBM7Q9Y580 266 aaKnown RBP8.17□□□□□ -1.1
RTF1-206ENST00000560447 CACNA1HO95180 2353 aa8.17□□□□□ -1.1
RTF1-206ENST00000560447 FAM24AA6NFZ4 105 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 A6NLC8 198 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
RTF1-206ENST00000560447 SRRM5B3KS81 715 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 H0YL77 283 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 TOR1AO14656 332 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 SSSCA1O60232 199 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 IGLV2-14P01704 120 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 HBE1P02100 147 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 CRYAAP02489 173 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 GLI4P10075 376 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 PSG2P11465 335 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 MUC1P15941 1255 aaPredicted RBP8.16□□□□□ -1.1
RTF1-206ENST00000560447 PAX6P26367 422 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 IL2RGP31785 369 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 SNCAP37840 140 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 CEACAM6P40199 344 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 SULT1A1P50225 295 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 NHLH2Q02577 135 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 FOXF2Q12947 444 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 CR1LQ2VPA4 569 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 TMEM30BQ3MIR4 351 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 Q6ZR03 302 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 SEM1Q6ZVN7 128 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 CLRN3Q8NCR9 226 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 FAM57AQ8TBR7 257 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 IL1F10Q8WWZ1 152 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 EDARADDQ8WWZ3 215 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 NINJ1Q92982 152 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 MUCL1Q96DR8 90 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 ATP5SQ99766 215 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 SMIM3Q9BZL3 60 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 OPN3Q9H1Y3 402 aaPredicted RBP8.16□□□□□ -1.1
RTF1-206ENST00000560447 OR1A1Q9P1Q5 309 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 NDRG3Q9UGV2 375 aa8.16□□□□□ -1.1
RTF1-206ENST00000560447 INTS1Q8N201 2190 aaKnown RBP8.15□□□□□ -1.1
RTF1-206ENST00000560447 GTF3C1Q12789 2109 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 CFAP54Q96N23 3096 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 IGLV3-9A0A075B6K5 115 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 FAM90A9PA6NNJ1 464 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 C12orf77C9JDV5 145 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 PROB1E7EW31 1015 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 ITGB1BP1O14713 200 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 ZNHIT1O43257 154 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 SPINT2O43291 252 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 TXNL1O43396 289 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 SYNGR2O43760 224 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 CHST1O43916 411 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 AGFG2O95081 481 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 IFNA5P01569 189 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 GZMHP20718 246 aa8.15□□□□□ -1.1
RTF1-206ENST00000560447 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms