RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 OR10A7Q8NGE5 316 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 OR13A1Q8NGR1 328 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 EDARADDQ8WWZ3 215 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 DACT3Q96B18 629 aaPredicted RBP5.33□□□□□ -1.56
SPG11-221ENST00000560299 PERPQ96FX8 193 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 ZNF486Q96H40 463 aaPredicted RBP5.33□□□□□ -1.56
SPG11-221ENST00000560299 DMRTB1Q96MA1 342 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 ZNF714Q96N38 554 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 CABLES2Q9BTV7 478 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 SSBP3Q9BWW4 388 aaPredicted RBP5.33□□□□□ -1.56
SPG11-221ENST00000560299 ALX4Q9H161 411 aaPredicted RBP5.33□□□□□ -1.56
SPG11-221ENST00000560299 C20orf85Q9H1P6 137 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 OR2S2Q9NQN1 319 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 GNG12Q9UBI6 72 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 ZNF69Q9UC07 566 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 OR2W1Q9Y3N9 320 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 YLPM1P49750 1951 aaKnown RBP5.33□□□□□ -1.56
SPG11-221ENST00000560299 DSCAML1Q8TD84 2053 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 TRAV6A0A075B6T7 132 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 LOC105371242A0A075B767 164 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 TRAV39A0A0B4J263 110 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 PPIAL4CA0A0B4J2A2 164 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 PIGBOS1A0A0B4J2F0 54 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 A0A1B0GW55 424 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 F2RL2O00254 374 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 ARPC1BO15143 372 aaKnown RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 PPYP01298 95 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 LIPFP07098 398 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4L2P0CJ85 424 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4L3P0CJ86 424 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4L4P0CJ87 422 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4L5P0CJ88 424 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4L6P0CJ89 424 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4L7P0CJ90 424 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 ZNF728P0DKX0 622 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 PPIAL4GP0DN37 164 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 SLC25A16P16260 332 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 NFYAP23511 347 aaPredicted RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 FPR2P25090 351 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 RBMXP38159 391 aaKnown RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 LUMP51884 338 aaPredicted RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 FXYD4P59646 89 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 UBE2MP61081 183 aaKnown RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 METTL11BQ5VVY1 283 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 WDR25Q64LD2 544 aaPredicted RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 FAHD2BQ6P2I3 314 aaPredicted RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4L9Q6RFH8 374 aaPredicted RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 LHFPL1Q86WI0 220 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 KRTAP1-3Q8IUG1 177 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 CMTM1Q8IZ96 169 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 H1FOOQ8IZA3 346 aaPredicted RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 SLC38A6Q8IZM9 456 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 CCDC71LQ8N9Z2 235 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 OR52M1Q8NGK5 317 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 OR1L1Q8NH94 360 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 RFESDQ8TAC1 157 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 C8orf46Q8TAG6 207 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 MARCH1Q8TCQ1 289 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 MOB3AQ96BX8 217 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 FAHD2AQ96GK7 314 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DCTN5Q9BTE1 182 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 BPESC1Q9GZL8 116 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 MMP28Q9H239 520 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 GHITMQ9H3K2 345 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 LIME1Q9H400 295 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 CALYQ9NYX4 217 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 IDI2-AS1Q9NZ38 188 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 CTSZQ9UBR2 303 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 DUX4Q9UBX2 424 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 JPT1Q9UK76 154 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 KCNIP3Q9Y2W7 256 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 SETD2Q9BYW2 2564 aaPredicted RBP5.32□□□□□ -1.56
SPG11-221ENST00000560299 MALRD1Q5VYJ5 2156 aa5.32□□□□□ -1.56
SPG11-221ENST00000560299 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
SPG11-221ENST00000560299 NF1P21359 2839 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TLN2Q9Y4G6 2542 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 OR5H14A6NHG9 310 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 VGLL3A8MV65 326 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 F5H0A9 414 aaPredicted RBP5.31□□□□□ -1.56
SPG11-221ENST00000560299 C15orf65H3BRN8 121 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 YPEL1O60688 119 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 FOXH1O75593 365 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TUSC2O75896 110 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 IGHV2-5P01817 119 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 RBP4P02753 201 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 IL5P05113 134 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 CTSDP07339 412 aaPredicted RBP5.31□□□□□ -1.56
SPG11-221ENST00000560299 CGB3P0DN86 165 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 CGB7P0DN87 165 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 ANXA3P12429 323 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 SPNP16150 400 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 AADACP22760 399 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 NFYBP25208 207 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 SSTR5P35346 364 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 RAB7AP51149 207 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 MECP2P51608 486 aaKnown RBP5.31□□□□□ -1.56
SPG11-221ENST00000560299 RAB25P57735 213 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 HERPUD1Q15011 391 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TATDN3Q17R31 274 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms