RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 TANC2Q9HCD6 1990 aa9.33□□□□□ -0.92
USP3-218ENST00000560202 ODAMA1E959 279 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 SNRPGP15A8MWD9 76 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 PPIHO43447 177 aaKnown RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 NMBP08949 121 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 CTXN2P0C2S0 81 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 CXCL3P19876 107 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 TMEM33P57088 247 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 HERPUD1Q15011 391 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 HMGN3Q15651 99 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 AVPI1Q5T686 147 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 DHRS11Q6UWP2 260 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 PDZD9Q8IXQ8 264 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 MUC20Q8N307 709 aaPredicted RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 OR13A1Q8NGR1 328 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 TERB2Q8NHR7 220 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 RAB1CQ92928 201 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 MRGPRFQ96AM1 343 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 TIMD4Q96H15 378 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 NCOR1P1Q9H4R4 102 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 TAF9BQ9HBM6 251 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 KCNIP1Q9NZI2 227 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 SLC25A10Q9UBX3 287 aaPredicted RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 IGKV1-6A0A0C4DH72 117 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 ARPC1BO15143 372 aaKnown RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 NDUFB3O43676 98 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 CFDP00746 253 aaPredicted RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 IL5P05113 134 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 NFYAP23511 347 aaPredicted RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 GLP1RP43220 463 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 MECP2P51608 486 aaKnown RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 ZNF660Q6AZW8 331 aaPredicted RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 NLRC3Q7RTR2 1065 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 LHFPL1Q86WI0 220 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 PRR18Q8N4B5 295 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 MRGPRDQ8TDS7 321 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 KIRREL1Q96J84 757 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 LURAP1Q96LR2 239 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 PSMG3-AS1Q96PY0 264 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 ZNF2Q9BSG1 426 aaPredicted RBP9.32□□□□□ -0.92
USP3-218ENST00000560202 DCTN5Q9BTE1 182 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 SLC25A32Q9H2D1 315 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 LIME1Q9H400 295 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 CTSZQ9UBR2 303 aa9.32□□□□□ -0.92
USP3-218ENST00000560202 OR5H14A6NHG9 310 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 C12orf77C9JDV5 145 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 DVL1O14640 695 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 OR2A4O95047 310 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 NDUFB7P17568 137 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 GZMHP20718 246 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 FCGR2CP31995 323 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 NPY4RP50391 375 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 FGL1Q08830 312 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 CR1LQ2VPA4 569 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 LRRC10Q5BKY1 277 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 AADACL3Q5VUY0 350 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 TRAT1Q6PIZ9 186 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 FGFRL1Q8N441 504 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 ZNF565Q8N9K5 539 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 IL1F10Q8WWZ1 152 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 OR2A7Q96R45 310 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 CABLES2Q9BTV7 478 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 OR6C3Q9NZP0 311 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 PCDHB10Q9UN67 800 aa9.31□□□□□ -0.92
USP3-218ENST00000560202 TRBV6-7A0A0A0MS04 114 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 MEX3AA1L020 520 aaKnown RBP9.3□□□□□ -0.92
USP3-218ENST00000560202 CEACAM18A8MTB9 384 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 H7C2Y5 167 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 FCN3O75636 299 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 IGHV4-39P01824 125 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 RLN1P04808 185 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 SSTR2P30874 369 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 S100A11P31949 105 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 GPR6P46095 362 aaPredicted RBP9.3□□□□□ -0.92
USP3-218ENST00000560202 TMEM155Q4W5P6 130 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 UQCC3Q6UW78 93 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 LINC00469Q8N7U9 141 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 ZDHHC22Q8N966 263 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 OR1L1Q8NH94 360 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 UBALD1Q8TB05 177 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 MARCH1Q8TCQ1 289 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 GALMQ96C23 342 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 OPN4Q9UHM6 478 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 VSIG4Q9Y279 399 aa9.3□□□□□ -0.92
USP3-218ENST00000560202 TRGV10A0A0A0MS01 117 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 G3V3Q6 166 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 C15orf65H3BRN8 121 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 DIRAS3O95661 229 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 HBZP02008 142 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 IFNA4P05014 189 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 ANXA7P20073 488 aaKnown RBP9.29□□□□□ -0.92
USP3-218ENST00000560202 IL2RGP31785 369 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 SSTR5P35346 364 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 OR10J5Q8NHC4 309 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 NRGNQ92686 78 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 ARL11Q969Q4 196 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 SCGB3A2Q96PL1 93 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 BEX1Q9HBH7 125 aa9.29□□□□□ -0.92
USP3-218ENST00000560202 MIOXQ9UGB7 285 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms