RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ATG4DQ86TL0 474 aaPredicted RBP16.47■□□□□ 0.23
SEMA4B-215ENST00000560089 C20orf196Q8IYI0 205 aa16.47■□□□□ 0.23
SEMA4B-215ENST00000560089 SLC22A18ASQ8N1D0 253 aa16.47■□□□□ 0.23
SEMA4B-215ENST00000560089 ADIPOR1Q96A54 375 aa16.47■□□□□ 0.23
SEMA4B-215ENST00000560089 ZNF850A8MQ14 1090 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 RBPJQ06330 500 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 OR11L1Q8NGX0 322 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 SCGB1C1Q8TD33 95 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 PATE1Q8WXA2 126 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 UHRF2Q96PU4 802 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 HDHD3Q9BSH5 251 aaPredicted RBP16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 FAM60AQ9NP50 221 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 MCTS1Q9ULC4 181 aaKnown RBP16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 TBL2Q9Y4P3 447 aaKnown RBP16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 SERINC4A6NH21 518 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 NXPH3O95157 252 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 TMEM50AO95807 157 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 CELA2BP08218 269 aaPredicted RBP16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 ZNF823P16415 610 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 RAET1LQ5VY80 246 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 WBP2NLQ6ICG8 309 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 SHISA5Q8N114 240 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 OR4S2Q8NH73 311 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 ANXA10Q9UJ72 324 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 DAPP1Q9UN19 280 aa16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 COA3Q9Y2R0 106 aaPredicted RBP16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 ARHGEF17Q96PE2 2063 aaPredicted RBP16.46■□□□□ 0.23
SEMA4B-215ENST00000560089 OR2T8A6NH00 312 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 ZNF253O75346 499 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 WNT2P09544 360 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 YPEL3P61236 119 aaPredicted RBP16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 TMEM95Q3KNT9 176 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 SLC38A9Q8NBW4 561 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 OR4F5Q8NH21 305 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 LHX4Q969G2 390 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 OR4F4Q96R69 305 aa16.46■□□□□ 0.22
SEMA4B-215ENST00000560089 TRAF3IP2O43734 574 aaPredicted RBP16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 B3GALT2O43825 422 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 OR7C2O60412 319 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 GPX1P07203 203 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 MDH2P40926 338 aaKnown RBP16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 PSMB3P49720 205 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 C1orf61Q13536 156 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 TMEFF1Q8IYR6 380 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 OR5AS1Q8N127 324 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 FAM89BQ8N5H3 189 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 MAFAQ8NHW3 353 aaPredicted RBP16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 FAM71F1Q96KD3 344 aaPredicted RBP16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 NRN1Q9NPD7 142 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 LGALS7P47929 136 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 MGAT2Q10469 447 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 NNATQ16517 81 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 ACKR1Q16570 336 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 COMMD2Q86X83 199 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 ATOH7Q8N100 152 aa16.45■□□□□ 0.22
SEMA4B-215ENST00000560089 CACNA1IQ9P0X4 2223 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 TAX1BP3O14907 124 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 ZIC4Q8N9L1 334 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 OR4C3Q8NH37 302 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 SPIN2AQ99865 258 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 SPIN2BQ9BPZ2 258 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 C9orf172C9J069 976 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 VENTXO95231 258 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 PAX2Q02962 417 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 SPIN3Q5JUX0 258 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 KIAA0895LQ68EN5 471 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 VN1R4Q7Z5H5 301 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 MUC15Q8N387 334 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 SGMS2Q8NHU3 365 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 TMEM186Q96B77 213 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 PBOV1Q9GZY1 135 aa16.44■□□□□ 0.22
SEMA4B-215ENST00000560089 DPRXA6NFQ7 191 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 MSR1P21757 451 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 CBLN1P23435 193 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 SRPXP78539 464 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 C6orf201Q7Z4U5 140 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 SARAFQ96BY9 339 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 NECAP2Q9NVZ3 263 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 FAM206AQ9NX38 181 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 IGHV1OR15-9A0A0B4J2B8 117 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 M0R296 226 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 RPL27P61353 136 aaKnown RBP16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 FOXL1Q12952 345 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 SCGB2A2Q13296 93 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 TIMM29Q9BSF4 260 aa16.43■□□□□ 0.22
SEMA4B-215ENST00000560089 CHST1O43916 411 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 GNG7O60262 68 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 NRASP01111 189 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 KRASP01116 189 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 AMTP48728 403 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 DMRTC1Q5HYR2 192 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 KLHL24Q6TFL4 600 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 TMEM52Q8NDY8 209 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 OR2M3Q8NG83 312 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 OR4F17Q8NGA8 305 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 OR51E1Q8TCB6 317 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 MRPL18Q9H0U6 180 aaKnown RBP16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 SLC39A9Q9NUM3 307 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 PCNX3Q9H6A9 2034 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 FOXI3A8MTJ6 420 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms