RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 OR52M1Q8NGK5 317 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 OR10J5Q8NHC4 309 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 LEAP2Q969E1 77 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 GINS4Q9BRT9 223 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 GFOD1Q9NXC2 390 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 KLK11Q9UBX7 282 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 ANXA10Q9UJ72 324 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 V9GYH0 126 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 CENPVL3A0A0U1RRI6 287 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 RNASEK-C17orf49H0YIS7 233 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 CTDSPLO15194 276 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 RGS11O94810 467 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 ARG1P05089 322 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 CTXN2P0C2S0 81 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 HOXB4P17483 251 aaPredicted RBP11.72□□□□□ -0.53
SMAD6-204ENST00000559931 HLA-DMAP28067 261 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 RCVRNP35243 200 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 GNG10P50151 68 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 LGALS4P56470 323 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 ACTBP60709 375 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 ACTG1P63261 375 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 HTD2P86397 168 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 TMEM30BQ3MIR4 351 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 STEAP3Q658P3 488 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 Q6ZS49 121 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 C1orf229Q6ZS94 237 aaPredicted RBP11.72□□□□□ -0.53
SMAD6-204ENST00000559931 LINC00299Q6ZSB3 139 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 Q8N402 240 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 SMIM4Q8WVI0 70 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 S100ZQ8WXG8 99 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 THAP7Q9BT49 309 aaPredicted RBP11.72□□□□□ -0.53
SMAD6-204ENST00000559931 CLEC7AQ9BXN2 247 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 BEX2Q9BXY8 128 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 UNKLQ9H9P5 680 aaKnown RBP11.72□□□□□ -0.53
SMAD6-204ENST00000559931 MTFP1Q9UDX5 166 aa11.72□□□□□ -0.53
SMAD6-204ENST00000559931 IGHV2-26A0A0B4J1V2 119 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 PMP2P02689 132 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 IGHV4-38-2P0DP08 117 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 PPP1CCP36873 323 aaKnown RBP11.71□□□□□ -0.53
SMAD6-204ENST00000559931 INPP1P49441 399 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 UBE2E1P51965 193 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 LOXL3P58215 753 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 TAS2R46P59540 309 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 GNMTQ14749 295 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 FAM53AQ6NSI3 398 aaPredicted RBP11.71□□□□□ -0.53
SMAD6-204ENST00000559931 OR5AP2Q8NGF4 316 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 OR5H2Q8NGV7 314 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 TNFRSF14Q92956 283 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 NECAP2Q9NVZ3 263 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 OR1A1Q9P1Q5 309 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 JPT1Q9UK76 154 aa11.71□□□□□ -0.53
SMAD6-204ENST00000559931 NSD1Q96L73 2696 aaPredicted RBP11.71□□□□□ -0.54
SMAD6-204ENST00000559931 SETD2Q9BYW2 2564 aaPredicted RBP11.7□□□□□ -0.54
SMAD6-204ENST00000559931 IGHV1-69DA0A0B4J2H0 117 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 IGKV1-6A0A0C4DH72 117 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 A0A1W2PPE3 182 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
SMAD6-204ENST00000559931 GSTZ1O43708 216 aaPredicted RBP11.7□□□□□ -0.54
SMAD6-204ENST00000559931 IGHV1-69P01742 117 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 SSBP1Q04837 148 aaKnown RBP11.7□□□□□ -0.54
SMAD6-204ENST00000559931 CDK10Q15131 360 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF79Q15937 498 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 MORN2Q502X0 79 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 UTF1Q5T230 341 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 BRD3OSQ6XYD6 125 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 LYSMD2Q8IV50 215 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 GDPD1Q8N9F7 314 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 OR9G1Q8NH87 305 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF596Q8TC21 504 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 SNAPC3Q92966 411 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 MS4A7Q9GZW8 240 aaPredicted RBP11.7□□□□□ -0.54
SMAD6-204ENST00000559931 TMEM160Q9NX00 188 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 TAS2R8Q9NYW2 309 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 EHFQ9NZC4 300 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF69Q9UC07 566 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 NUP50Q9UKX7 468 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 PSG11Q9UQ72 335 aa11.7□□□□□ -0.54
SMAD6-204ENST00000559931 FN1P02751 2386 aaKnown RBP11.7□□□□□ -0.54
SMAD6-204ENST00000559931 TRBV6-7A0A0A0MS04 114 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 INAFM1C9JVW0 142 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 J3QR06 171 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 NPFFO15130 113 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 YPEL1O60688 119 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 IFNA6P05013 189 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 CSF1P09603 554 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 NAT1P18440 290 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 RFX2P48378 723 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 TSPAN5P62079 268 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF846Q147U1 533 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 HERPUD1Q15011 391 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 KLF17Q5JT82 389 aaPredicted RBP11.69□□□□□ -0.54
SMAD6-204ENST00000559931 RUSC1-AS1Q66K80 236 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 HCP5Q6MZN7 132 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 OR2AK2Q8NG84 335 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 OR11H6Q8NGC7 330 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 OR10X1Q8NGY0 326 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 YPEL2Q96QA6 119 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 CABLES2Q9BTV7 478 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms