RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 OR10V1Q8NGI7 309 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 OR8U1Q8NH10 309 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 Q96M66 194 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 P2RX4Q99571 388 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 VCXQ9H320 206 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 BANF2Q9H503 90 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 TAF9BQ9HBM6 251 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 PLCXD1Q9NUJ7 323 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 ZNF580Q9UK33 172 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 ERGIC3Q9Y282 383 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 LRRC42Q9Y546 428 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 WI2-2373I1.2A0A1W2PRP0 233 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 SLC31A2O15432 143 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 LANCL1O43813 399 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 PDCD6O75340 191 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 RGS11O94810 467 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 CDX1P47902 265 aaPredicted RBP9.65□□□□□ -0.86
SPG11-219ENST00000559822 KRTAP10-11P60412 298 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 RCN1Q15293 331 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 CT45A1Q5HYN5 189 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 VAX1Q5SQQ9 334 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 AHSA2Q719I0 299 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 FAM71E2Q8N5Q1 922 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 RNF152Q8N8N0 203 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 OR1L1Q8NH94 360 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 CT45A3Q8NHU0 189 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 TFAP2CQ92754 450 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 CHCHD6Q9BRQ6 235 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 OR2S2Q9NQN1 319 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 MBNL3Q9NUK0 354 aaKnown RBP9.65□□□□□ -0.86
SPG11-219ENST00000559822 PSORS1C1Q9UIG5 152 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
SPG11-219ENST00000559822 UBE2QL1A1L167 161 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 H0YHG0 523 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 CCL24O00175 119 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 RPLP1P05386 114 aaKnown RBP9.64□□□□□ -0.87
SPG11-219ENST00000559822 RCC1P18754 421 aaPredicted RBP9.64□□□□□ -0.87
SPG11-219ENST00000559822 ZNF134P52741 427 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 RAB25P57735 213 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 HTD2P86397 168 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 CD69Q07108 199 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 LSAMPQ13449 338 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 MMDQ15546 238 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 MORN2Q502X0 79 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 GLT8D1Q68CQ7 371 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 C18orf65Q6ZTR6 163 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 MS4A15Q8N5U1 240 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 NANOGP1Q8N7R0 232 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 BPIFB6Q8NFQ5 453 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 OR5M8Q8NGP6 311 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 NEDD4LQ96PU5 975 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 ABHD14AQ9BUJ0 271 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 MND1Q9BWT6 205 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 DCLRE1BQ9H816 532 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 PLSCR3Q9NRY6 295 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 ABRACLQ9P1F3 81 aa9.64□□□□□ -0.87
SPG11-219ENST00000559822 LINC01548A6NM66 108 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 ZNF736B4DX44 427 aaPredicted RBP9.63□□□□□ -0.87
SPG11-219ENST00000559822 YPEL1O60688 119 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 RAMP3O60896 148 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 IGHG4P01861 327 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 IGF1P05019 195 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 GNAO1P09471 354 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 VHLP40337 213 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 DGCR2P98153 550 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 KIR2DS1Q14954 304 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 NKAPLQ5M9Q1 402 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 LY6G6FQ5SQ64 297 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 FAM53AQ6NSI3 398 aaPredicted RBP9.63□□□□□ -0.87
SPG11-219ENST00000559822 LYPD6Q86Y78 171 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 OR2AK2Q8NG84 335 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 FBLIM1Q8WUP2 373 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 PHYHIPQ92561 330 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 FAM46BQ96A09 425 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 GALMQ96C23 342 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 RAX2Q96IS3 184 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 YPEL2Q96QA6 119 aa9.63□□□□□ -0.87
SPG11-219ENST00000559822 ZNF107Q9UII5 783 aaPredicted RBP9.63□□□□□ -0.87
SPG11-219ENST00000559822 CASQ2O14958 399 aaPredicted RBP9.62□□□□□ -0.87
SPG11-219ENST00000559822 MYF6P23409 242 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 F2RL1P55085 397 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 GABPB1Q06547 395 aaPredicted RBP9.62□□□□□ -0.87
SPG11-219ENST00000559822 ACSM3Q53FZ2 586 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 C9orf66Q5T8R8 295 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 OGFRL1Q5TC84 451 aaPredicted RBP9.62□□□□□ -0.87
SPG11-219ENST00000559822 RNLSQ5VYX0 342 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 SIGIRRQ6IA17 410 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 LCNL1Q6ZST4 164 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 KCNG3Q8TAE7 436 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 MRPL30Q8TCC3 161 aaKnown RBP9.62□□□□□ -0.87
SPG11-219ENST00000559822 C4orf3Q8WVX3 66 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 B9D2Q9BPU9 175 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 HSPB9Q9BQS6 159 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 ZNF251Q9BRH9 671 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 TMEM59Q9BXS4 323 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPG11-219ENST00000559822 STEAP1Q9UHE8 339 aa9.62□□□□□ -0.87
SPG11-219ENST00000559822 HLA-DRB1P01911 266 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 CDK1P06493 297 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 SLC2A2P11168 524 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms