RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 BOLA2-SMG1P6H3BVE0 249 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 CTDSPLO15194 276 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 APOL3O95236 402 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 LALBAP00709 142 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 LPLP06858 475 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 FAM90A13PP0C7W8 464 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 FAM90A24PP0C7X0 464 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 CGB3P0DN86 165 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 CGB7P0DN87 165 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 AZGP1P25311 298 aaKnown RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 LMO1P25800 156 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 MAPK3P27361 379 aaPredicted RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 HTR1DP28221 377 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 CD34P28906 385 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 ERP29P30040 261 aaKnown RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 HOXD3P31249 432 aaPredicted RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 GLIPR1P48060 266 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 FUT6P51993 359 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 P2RX3P56373 397 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 OR12D2P58182 307 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 NANOS3P60323 173 aaKnown RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 ZNF85Q03923 595 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 MXD1Q05195 221 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 GRK1Q15835 563 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 BAK1Q16611 211 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 C17orf58Q2M2W7 97 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 ABCA11PQ4W5N1 156 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 PYDC2Q56P42 97 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 YIF1BQ5BJH7 314 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 PRAMEF5Q5TYX0 476 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 PYHIN1Q6K0P9 492 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 Q6P435 159 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 CNIH2Q6PI25 160 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 PLET1Q6UQ28 207 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 UNQ9370/PRO34162Q6UXP9 181 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 C18orf65Q6ZTR6 163 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 NRARPQ7Z6K4 114 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 FAM58AQ8N1B3 248 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 ABHD12Q8N2K0 398 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 Q8N402 240 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 OR10AC1Q8NH08 325 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 ENKURQ8TC29 256 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 CORO2AQ92828 525 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 EMG1Q92979 244 aaKnown RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 COQ2Q96H96 371 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 PGLYRP3Q96LB9 341 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 RBM14Q96PK6 669 aaKnown RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 TBX5Q99593 518 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 SLC25A33Q9BSK2 321 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 ZNF286AQ9HBT8 521 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 DPM3Q9P2X0 92 aa4.59□□□□□ -1.67
USP3-215ENST00000559771 TSSC4Q9Y5U2 329 aaPredicted RBP4.59□□□□□ -1.67
USP3-215ENST00000559771 A0A087X0M5 115 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 LOC107986453A0A1B0GWG9 222 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 A0A1B0GX30 115 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 TCRBV4S1A1TA0A5B7 111 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 CENPXA8MT69 81 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 BUB1B-PAK6H3BSN5 160 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 J3QLW9 94 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SIRPB1O00241 398 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 MGST3O14880 152 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SHOXO15266 292 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SYT7O43581 403 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SULT1B1O43704 296 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 ORC5O43913 435 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 CCNKO75909 580 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 KDM4BO94953 1096 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 OR2F2O95006 317 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 OR2H2O95918 312 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 UCHL1P09936 223 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 ZNF19P17023 458 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 RAB3BP20337 219 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 GABRR1P24046 479 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 CDK2P24941 298 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 RFX2P48378 723 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 INPP1P49441 399 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SNU13P55769 128 aaKnown RBP4.58□□□□□ -1.68
USP3-215ENST00000559771 MRPS10P82664 201 aaKnown RBP4.58□□□□□ -1.68
USP3-215ENST00000559771 AESQ08117 197 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 PDZK1IP1Q13113 114 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 IL18Q14116 193 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 DIAPH2-AS1Q14236 149 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 CDK5R1Q15078 307 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 HLA-DRB5Q30154 266 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 TP53I3Q53FA7 332 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 ACSM3Q53FZ2 586 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 ANKRD39Q53RE8 183 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SPIN3Q5JUX0 258 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 TPTE2P1Q5T6R2 138 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SFXN4Q6P4A7 337 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 HEPN1Q6WQI6 88 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 C16orf82Q7Z2V1 217 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 FAM220AQ7Z4H9 259 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 CEACAM19Q7Z692 300 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 CENPVQ7Z7K6 275 aaPredicted RBP4.58□□□□□ -1.68
USP3-215ENST00000559771 SNX29P2Q8IUI4 249 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 YIPF7Q8N8F6 280 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 DNAAF1Q8NEP3 725 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms