RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 OR4E1P0C645 316 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 DLX1P56177 255 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 LOXL3P58215 753 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 HERV-K104P61576 105 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 PHLDA2Q53GA4 152 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 ZNF565Q8N9K5 539 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 OR2S2Q9NQN1 319 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 HECTD1Q9ULT8 2610 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 MED13LQ71F56 2210 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 SVEP1Q4LDE5 3571 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 KBTBD11-OT1A0A1B0GTJ5 212 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 C22orf46C9J442 243 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 IGLV2-14P01704 120 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 CTXN2P0C2S0 81 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 SUPT4H1P63272 117 aaKnown RBP14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 PRB3Q04118 309 aaPredicted RBP14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 DHRS2Q13268 280 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 C4orf46Q504U0 113 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 ZNF818PQ6ZRF7 136 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 SLC25A42Q86VD7 318 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 CHAC2Q8WUX2 184 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 C5orf30Q96GV9 206 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 OR51J1Q9H342 316 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 CCL28Q9NRJ3 127 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 CLN8Q9UBY8 286 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 OR2W1Q9Y3N9 320 aa14.27□□□□□ -0.12
CHRNA3-206ENST00000559658 HSD17B6O14756 317 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 SPINT2O43291 252 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 ZBTB25P24278 435 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 GNRHRP30968 328 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 WDR25Q64LD2 544 aaPredicted RBP14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 OR8B3Q8NGG8 313 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 NEIL1Q96FI4 390 aaPredicted RBP14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 OR8B2Q96RD0 313 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 NCOR1P1Q9H4R4 102 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 ZNRD1Q9P1U0 126 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 LINC00312Q9Y6C7 94 aa14.27□□□□□ -0.13
CHRNA3-206ENST00000559658 A0A1W2PPE3 182 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 hADV38S2A0JD32 116 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 F5H0A9 414 aaPredicted RBP14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 F2RL2O00254 374 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 SLC31A2O15432 143 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 HLA-AP01891 365 aaKnown RBP14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 GZMHP20718 246 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 ZNF626Q68DY1 528 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 TRAT1Q6PIZ9 186 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 SPICQ8N5J4 248 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 CORO2AQ92828 525 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 NEURL2Q9BR09 285 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 SLC5A7Q9GZV3 580 aa14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 PATZ1Q9HBE1 687 aaKnown RBP14.26□□□□□ -0.13
CHRNA3-206ENST00000559658 NAV2Q8IVL1 2488 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 TNFSF12O43508 249 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 DIRAS3O95661 229 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 CTSDP07339 412 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 OR8U9P0C7N5 309 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 VAMP1P23763 118 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 ZNF134P52741 427 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 DLX6P56179 175 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 PIGPP57054 158 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 FCN2Q15485 313 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 SURF2Q15527 256 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 C2orf68Q2NKX9 166 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 LIN54Q6MZP7 749 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 ZNF554Q86TJ5 538 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 OR8U1Q8NH10 309 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 RSRP1Q9BUV0 290 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 SLC2A9Q9NRM0 540 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 MIOXQ9UGB7 285 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 RNF150Q9ULK6 438 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 UNC79Q9P2D8 2635 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 ST8SIA5O15466 376 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 IL5P05113 134 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 CXCL3P19876 107 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 NFYBP25208 207 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 HTD2P86397 168 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 MEF2CQ06413 473 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 SLC9A3R2Q15599 337 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 METTL11BQ5VVY1 283 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 NLRC3Q7RTR2 1065 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 OR11H7Q8NGC8 314 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 CLDND2Q8NHS1 167 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 CASTOR1Q8WTX7 329 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 ZNF714Q96N38 554 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 GNG12Q9UBI6 72 aa14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 UBE2J1Q9Y385 318 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-206ENST00000559658 IGHV4-30-2A0A087WSY4 118 aa14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 ZNF729A6NN14 1252 aaPredicted RBP14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 PRAF2O60831 178 aa14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 ZFP36P26651 326 aaKnown RBP14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 PDLIM4P50479 330 aa14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 UCP3P55916 312 aa14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 C11orf42Q8N5U0 333 aa14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 C10orf105Q8TEF2 133 aa14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 ALX4Q9H161 411 aaPredicted RBP14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 C14orf166Q9Y224 244 aaKnown RBP14.24□□□□□ -0.13
CHRNA3-206ENST00000559658 C9orf170A2RU37 121 aa14.23□□□□□ -0.13
CHRNA3-206ENST00000559658 IGHV2-5P01817 119 aa14.23□□□□□ -0.13
CHRNA3-206ENST00000559658 SSTR2P30874 369 aa14.23□□□□□ -0.13
CHRNA3-206ENST00000559658 RRAS2P62070 204 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms