RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 KIF25Q9UIL4 384 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 HILPDAQ9Y5L2 63 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 LINC00312Q9Y6C7 94 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 MEIKINA0A087WXM9 373 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 ODAMA1E959 279 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 CLDN34H7C241 214 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 K7EQM0 130 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 CRTAPO75718 401 aaPredicted RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 CLPXO76031 633 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 MEF2CQ06413 473 aaPredicted RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 SRSF4Q08170 494 aaKnown RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 SSX2Q16385 188 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 UTF1Q5T230 341 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 LDLRAD3Q86YD5 345 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 SUMF2Q8NBJ7 301 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 OR13D1Q8NGV5 346 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 RFESDQ8TAC1 157 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 NDNFQ8TB73 568 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 CCDC107Q8WV48 283 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 NPIPB3Q92617 1050 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 KCNK15Q9H427 330 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 DUSP21Q9H596 190 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 RANGRFQ9HD47 186 aaPredicted RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 FSTP19883 344 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 LMO1P25800 156 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 HTR2BP41595 481 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 GP2P55259 537 aaKnown RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 RAG2P55895 527 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 RBM11P57052 281 aaKnown RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 RBM39Q14498 530 aaKnown RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 MIDNQ504T8 468 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 TMEM41BQ5BJD5 291 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 ELP2Q6IA86 826 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 OR10K2Q6IF99 312 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 CCDC144NLQ6NUI1 221 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 SPARTQ8N0X7 666 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 CHST4Q8NCG5 386 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 OR13A1Q8NGR1 328 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 MRGPRDQ8TDS7 321 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 LEAP2Q969E1 77 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 DPCDQ9BVM2 203 aaPredicted RBP7.82□□□□□ -1.16
SPG11-214ENST00000558989 TMEM133Q9H2Q1 129 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 C1RLQ9NZP8 487 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 RAB26Q9ULW5 256 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 FOXJ3Q9UPW0 622 aa7.82□□□□□ -1.16
SPG11-214ENST00000558989 IGHV2-26A0A0B4J1V2 119 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 FUOMA2VDF0 154 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 GTF2F2P13984 249 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 ERP29P30040 261 aaKnown RBP7.81□□□□□ -1.16
SPG11-214ENST00000558989 BDH1Q02338 343 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 IL18Q14116 193 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 IL13RA2Q14627 380 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 HSD17B12Q53GQ0 312 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 LDLRAD2Q5SZI1 272 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 RNLSQ5VYX0 342 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 DHRS7BQ6IAN0 325 aaPredicted RBP7.81□□□□□ -1.16
SPG11-214ENST00000558989 TMEM88Q6PEY1 159 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 ASCL4Q6XD76 172 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 BEND2Q8NDZ0 799 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 TMEM104Q8NE00 496 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 OR51T1Q8NGJ9 327 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 DYRK2Q92630 601 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 BARHL1Q9BZE3 327 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 SELENOIQ9C0D9 397 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 GAL3ST2Q9H3Q3 398 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 RHOFQ9HBH0 211 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 VPREB3Q9UKI3 123 aa7.81□□□□□ -1.16
SPG11-214ENST00000558989 USP17L23D6RBM5 183 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 GPX5O75715 221 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 LYL1P12980 280 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 RPA2P15927 270 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 CD24P25063 80 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 COMPP49747 757 aaPredicted RBP7.8□□□□□ -1.16
SPG11-214ENST00000558989 GPR50Q13585 617 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 LRRC75BQ2VPJ9 315 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 ZNF600Q6ZNG1 722 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 PRSS48Q7RTY5 328 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 TMEM219Q86XT9 240 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 ABHD12Q8N2K0 398 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 MS4A15Q8N5U1 240 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 TMEM86BQ8N661 226 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 MGLLQ99685 303 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 CLEC7AQ9BXN2 247 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 GON7Q9BXV9 100 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 SEBOXQ9HB31 216 aaPredicted RBP7.8□□□□□ -1.16
SPG11-214ENST00000558989 ZNF286AQ9HBT8 521 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 KIAA1456Q9P272 454 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 AK6Q9Y3D8 172 aaKnown RBP7.8□□□□□ -1.16
SPG11-214ENST00000558989 A0A1W2PPE3 182 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 UBE2QL1A1L167 161 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 CRYGCP07315 174 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 GYPEP15421 78 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 MGMTP16455 207 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 SRMP19623 302 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 SSTR5P35346 364 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 GNG10P50151 68 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 C17orf58Q2M2W7 97 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 VWC2Q2TAL6 325 aa7.8□□□□□ -1.16
SPG11-214ENST00000558989 NKAPLQ5M9Q1 402 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms