RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 HIST1H1CP16403 213 aaKnown RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 ACTR1BP42025 376 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 MAGEA2P43356 314 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 CDC34P49427 236 aaPredicted RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 RPL14P50914 215 aaKnown RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 UBE2IP63279 158 aaKnown RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 DHRS2Q13268 280 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 CLEC12BQ2HXU8 276 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 ELP2Q6IA86 826 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 LAIR2Q6ISS4 152 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 TTC33Q6PID6 262 aaPredicted RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 DRAM2Q6UX65 266 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 CLEC20AQ6ZU45 233 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 OLIG3Q7RTU3 272 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 BLIDQ8IZY5 108 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 FER1L6-AS1Q8NA97 138 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 OR4P4Q8NGL7 312 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 CMBLQ96DG6 245 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 C20orf166-AS1Q96NR2 134 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 TRIB3Q96RU7 358 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 GPR22Q99680 433 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 B9D2Q9BPU9 175 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 SPZ1Q9BXG8 430 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 EBPLQ9BY08 206 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 NSRP1Q9H0G5 558 aaKnown RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 METTL9Q9H1A3 318 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 OR51E2Q9H255 320 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 FBXL15Q9H469 300 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 METTL17Q9H7H0 456 aaPredicted RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 TMEM106BQ9NUM4 274 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 PLEKHJ1Q9NW61 149 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 USE1Q9NZ43 259 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 NAGKQ9UJ70 344 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 POMPQ9Y244 141 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 TBL2Q9Y4P3 447 aaKnown RBP1.19□□□□□ -2.22
VPS13C-207ENST00000558919 ATAD5Q96QE3 1844 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 MYO15BQ96JP2 1530 aa1.19□□□□□ -2.22
VPS13C-207ENST00000558919 FBN3Q75N90 2809 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 CHD2O14647 1828 aaKnown RBP1.18□□□□□ -2.22
VPS13C-207ENST00000558919 TRBV24-1A0A075B6N3 115 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 SSNA1O43805 119 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 EPPINO95925 133 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 APOEP02649 317 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 OPN1SWP03999 348 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 OCM2P0CE71 109 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 CTLA4P16410 223 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 CSRP1P21291 193 aaKnown RBP1.18□□□□□ -2.22
VPS13C-207ENST00000558919 CRABP2P29373 138 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 GRPRP30550 384 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 HSPA13P48723 471 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 INPP1P49441 399 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 BLVRAP53004 296 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 DYNLL1P63167 89 aaKnown RBP1.18□□□□□ -2.22
VPS13C-207ENST00000558919 DEFB103AP81534 67 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 FAM3AP98173 230 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 PAFAH1B3Q15102 231 aaKnown RBP1.18□□□□□ -2.22
VPS13C-207ENST00000558919 PYCR3Q53H96 274 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 CDKL4Q5MAI5 379 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 CYHR1Q6ZMK1 362 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 NIT1Q86X76 327 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 TMEM251Q8N6I4 163 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 DNAAF3Q8N9W5 541 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 Q8NAQ8 132 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 STOML3Q8TAV4 291 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 OR5P3Q8WZ94 311 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 SLC25A44Q96H78 314 aaPredicted RBP1.18□□□□□ -2.22
VPS13C-207ENST00000558919 REEP6Q96HR9 211 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 PRSS27Q9BQR3 290 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 HIGD2AQ9BW72 106 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 FGFR1OP2Q9NVK5 253 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 FAM206AQ9NX38 181 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 OR5V1Q9UGF6 321 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.18□□□□□ -2.22
VPS13C-207ENST00000558919 U3KQK5 164 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 CACNA1SQ13698 1873 aa1.18□□□□□ -2.22
VPS13C-207ENST00000558919 MYO3BQ8WXR4 1341 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 CEP170Q5SW79 1584 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 MYO9BQ13459 2157 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 IGKV1D-37A0A075B6S9 117 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 IGHV3OR15-7A0A075B7D8 119 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 A6NED7 52 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 SMIM23A6NLE4 172 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 C8orf87E5RJ46 101 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 F5H768 121 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 SLC16A4O15374 487 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 STX10O60499 249 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 SH2D1AO60880 128 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 AHSA1O95433 338 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 ASS1P00966 412 aaKnown RBP1.17□□□□□ -2.22
VPS13C-207ENST00000558919 PRB1P04280 392 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 GUSBP08236 651 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 PSKH1P11801 424 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 UGT2B7P16662 529 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 ADORA1P30542 326 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 COILP38432 576 aaPredicted RBP1.17□□□□□ -2.22
VPS13C-207ENST00000558919 MP68P56378 58 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 CLDN12P56749 244 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 MAGOHP61326 146 aaKnown RBP1.17□□□□□ -2.22
VPS13C-207ENST00000558919 GTF2BQ00403 316 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 ITGB3BPQ13352 177 aaPredicted RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms