RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 SAMD10Q9BYL1 202 aa13.88□□□□□ -0.19
HMBOX1-212ENST00000558662 PATZ1Q9HBE1 687 aaKnown RBP13.88□□□□□ -0.19
HMBOX1-212ENST00000558662 PSENENQ9NZ42 101 aa13.88□□□□□ -0.19
HMBOX1-212ENST00000558662 MRPL27Q9P0M9 148 aaKnown RBP13.88□□□□□ -0.19
HMBOX1-212ENST00000558662 COPS7AQ9UBW8 275 aa13.88□□□□□ -0.19
HMBOX1-212ENST00000558662 DIRC3C9JPN6 131 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 MT-ND6P03923 174 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 JMJD7P0C870 316 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 TNFSF4P23510 183 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 FBLN7Q53RD9 439 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 FOXL2NBQ6ZUU3 175 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 WDFY1Q8IWB7 410 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 LYG1Q8N1E2 194 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 RPP25LQ8N5L8 163 aaKnown RBP13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 ZNF441Q8N8Z8 693 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 MRPL43Q8N983 215 aaKnown RBP13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 CCL4L1Q8NHW4 92 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 SPTSSAQ969W0 71 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 CHRNA10Q9GZZ6 450 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 KCNIP2Q9NS61 270 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 SLC7A10Q9NS82 523 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 ZNF581Q9P0T4 197 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 THADAQ6YHU6 1953 aa13.87□□□□□ -0.19
HMBOX1-212ENST00000558662 IGHV1-69-2A0A0G2JMI3 117 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 MDFIC2A0A1B0GVS7 189 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 NDUFS8O00217 210 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 COX5AP20674 150 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 MSR1P21757 451 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 PMCHL1Q16048 86 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 OR10J3Q5JRS4 329 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 Q6ZN92 141 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 C19orf35Q6ZS72 473 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 RD3Q7Z3Z2 195 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 SFTPA1Q8IWL2 248 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 ZNF295-AS1Q8N0V1 137 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 ZNF321PQ8N8H1 164 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 STARD4Q96DR4 205 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 OXGR1Q96P68 337 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 KIAA2026Q5HYC2 2103 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 LRP4O75096 1905 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 LOC105371242A0A075B767 164 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 SLC31A1O15431 190 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 ZNF253O75346 499 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 HYPMO75409 117 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 SERF1AO75920 110 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 F2RP25116 425 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 RHOGP84095 191 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 DLX2Q07687 328 aaPredicted RBP13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 TMEM267Q0VDI3 215 aaPredicted RBP13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 DEFB110Q30KQ9 67 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 TDRG1Q3Y452 100 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 ZNF818PQ6ZRF7 136 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 GAPTQ8N292 157 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 TSACCQ96A04 125 aaPredicted RBP13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 SMIM12Q96EX1 92 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 BORCS8Q96FH0 119 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 SFRP2Q96HF1 295 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 EMC6Q9BV81 110 aa13.86□□□□□ -0.19
HMBOX1-212ENST00000558662 DOCK8Q8NF50 2099 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 OTOL1A6NHN0 477 aaPredicted RBP13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 TRAF3IP2O43734 574 aaPredicted RBP13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 WISP1O95388 367 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 GPX1P07203 203 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 TMEM11P17152 192 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 ARF6P62330 175 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 ETFRF1Q6IPR1 90 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 BAGE3Q86Y29 109 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 BAGE2Q86Y30 109 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 APH1AQ96BI3 265 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 GPR146Q96CH1 333 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 TP53TG3Q9ULZ0 132 aa13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 ARHGEF17Q96PE2 2063 aaPredicted RBP13.85□□□□□ -0.19
HMBOX1-212ENST00000558662 OR2J2O76002 312 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 SERPINE2P07093 398 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 CEACAM8P31997 349 aaPredicted RBP13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 ARR3P36575 388 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 CLDN15P56746 228 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 RBM11P57052 281 aaKnown RBP13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 RPS18P62269 152 aaKnown RBP13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 C10orf128Q5T292 105 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 TMEM42Q69YG0 159 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 Q8NFD4 153 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 OR4C12Q96R67 309 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 LY96Q9Y6Y9 160 aa13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 ARID1BQ8NFD5 2236 aaPredicted RBP13.84□□□□□ -0.19
HMBOX1-212ENST00000558662 IGHV2-26A0A0B4J1V2 119 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 SLC22A20A6NK97 555 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 CD300LBA8K4G0 201 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 PRKNO60260 465 aaPredicted RBP13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 KITLGP21583 273 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 CDKN1AP38936 164 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 VIPR2P41587 438 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 FUT6P51993 359 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 FBXW4P57775 412 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 LINC00310P59036 64 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 MFAP5Q13361 173 aa13.83□□□□□ -0.19
HMBOX1-212ENST00000558662 WDR73Q6P4I2 378 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms