RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 OR5R1Q8NH85 324 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 CREB3L1Q96BA8 519 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 GALMQ96C23 342 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.08□□□□□ -0.8
LRRC28-206ENST00000558471 GNG12Q9UBI6 72 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 VPREB3Q9UKI3 123 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 ELF5Q9UKW6 265 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-206ENST00000558471 TMEM89A2RUT3 159 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 POM121CA8CG34 1229 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 SERPINE3A8MV23 424 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 SLC31A2O15432 143 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 SCTP09683 121 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 CEACAM3P40198 252 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 ACTG1P63261 375 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 HTD2P86397 168 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 ARFRP1Q13795 201 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 DIAPH2-AS1Q14236 149 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 GNMTQ14749 295 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 LY6EQ16553 131 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 ZNF260Q3ZCT1 412 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 Q3ZCU0 254 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 CT45A1Q5HYN5 189 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 MOB1BQ7L9L4 216 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 CLVS1Q8IUQ0 354 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-206ENST00000558471 LINC00311Q8N616 119 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 C8orf31Q8N9H6 132 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 ZNF439Q8NDP4 499 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 CT45A3Q8NHU0 189 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 GCDHQ92947 438 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-206ENST00000558471 OCSTAMPQ9BR26 566 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 DCSTAMPQ9H295 470 aa10.07□□□□□ -0.8
LRRC28-206ENST00000558471 SCGNO76038 276 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 FCGR3AP08637 254 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 HKR1P10072 659 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 PPP1CCP36873 323 aaKnown RBP10.06□□□□□ -0.8
LRRC28-206ENST00000558471 RORCP51449 518 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 DYNLT3P51808 116 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 HLA-DRB3P79483 266 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 MRPS15P82914 257 aaKnown RBP10.06□□□□□ -0.8
LRRC28-206ENST00000558471 MADCAM1Q13477 382 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 ARL6IP1Q15041 203 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 OR10X1Q8NGY0 326 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 IL1F10Q8WWZ1 152 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 PHF21AQ96BD5 680 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 ABCB10Q9NRK6 738 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 ZNF230Q9UIE0 474 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-206ENST00000558471 SCOCQ9UIL1 159 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 JPT1Q9UK76 154 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 MGAT4AQ9UM21 535 aa10.06□□□□□ -0.8
LRRC28-206ENST00000558471 AMMECR1Q9Y4X0 333 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-206ENST00000558471 TRAV18A0A075B6X5 111 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 TMEM235A6NFC5 223 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 OOSP1A8MZH6 123 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 TRDCB7Z8K6 153 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 YPEL1O60688 119 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 CRYBA1P05813 215 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 GSTP1P09211 210 aaKnown RBP10.05□□□□□ -0.8
LRRC28-206ENST00000558471 CD24P25063 80 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 TALDO1P37837 337 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 RELBQ01201 579 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 SPCS2Q15005 226 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 LY6G6FQ5SQ64 297 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 HACD4Q5VWC8 232 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 STEAP3Q658P3 488 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 CCBE1Q6UXH8 406 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-206ENST00000558471 SLC25A48Q6ZT89 311 aaKnown RBP10.05□□□□□ -0.8
LRRC28-206ENST00000558471 IZUMO1Q8IYV9 350 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 SAMD12Q8N8I0 201 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 MAFIPQ8WZ33 124 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 TOMM40LQ969M1 308 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 RPEQ96AT9 228 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 KCTD12Q96CX2 325 aaKnown RBP10.05□□□□□ -0.8
LRRC28-206ENST00000558471 YPEL2Q96QA6 119 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 ABCG5Q9H222 651 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 DIABLOQ9NR28 239 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 C1RLQ9NZP8 487 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 TCF19Q9Y242 345 aa10.05□□□□□ -0.8
LRRC28-206ENST00000558471 IGKV1D-8A0A087WSZ0 117 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 A0A0A6YYH2 397 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 IGKV1-6A0A0C4DH72 117 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 A6NDX4 124 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 A6NJ64 397 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 GSTT2P0CG29 244 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 GSTT2BP0CG30 244 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 BRS3P32247 399 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 TMBIM6P55061 237 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 RPL15P61313 204 aaKnown RBP10.04□□□□□ -0.8
LRRC28-206ENST00000558471 PNLIPRP3Q17RR3 467 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 UBE2NLQ5JXB2 153 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 DTX3Q8N9I9 347 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 SPATA3Q8NHX4 192 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 NUDCD2Q8WVJ2 157 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 ST6GALNAC6Q969X2 333 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 S100A16Q96FQ6 103 aaKnown RBP10.04□□□□□ -0.8
LRRC28-206ENST00000558471 OR1A1Q9P1Q5 309 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 COMMD3Q9UBI1 195 aa10.04□□□□□ -0.8
LRRC28-206ENST00000558471 A0A1W2PPI3 338 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 HSD17B6O14756 317 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 FABP7O15540 132 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms