RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CD3GP09693 182 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 SERPINB10P48595 397 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 DYNLT3P51808 116 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 SCAND1P57086 179 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 NCS1P62166 190 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 MADCAM1Q13477 382 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 Q3ZCU0 254 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 GPR141Q7Z602 305 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 ANKRD13BQ86YJ7 626 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 OR52L2PQ8NGH6 319 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 OR5H6Q8NGV6 325 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 PIFOQ8TCI5 191 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 TOMM40LQ969M1 308 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 NAA50Q9GZZ1 169 aaKnown RBP9.96□□□□□ -0.82
SMAD3-205ENST00000558428 RHBDL2Q9NX52 303 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 C1RLQ9NZP8 487 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 JPT1Q9UK76 154 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 MGAT4AQ9UM21 535 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 TCF19Q9Y242 345 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 KCNK7Q9Y2U2 307 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 ETV7Q9Y603 341 aa9.96□□□□□ -0.82
SMAD3-205ENST00000558428 SERPINE3A8MV23 424 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 OOSP1A8MZH6 123 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 SLC31A2O15432 143 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 TMEM127O75204 238 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 SCGNO76038 276 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 TFAP2AP05549 437 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 BRS3P32247 399 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 MNDAP41218 407 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 ALDH3B2P48448 385 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 COMPP49747 757 aaPredicted RBP9.95□□□□□ -0.82
SMAD3-205ENST00000558428 RAG2P55895 527 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 HLA-DRB3P79483 266 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 HTD2P86397 168 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 RELBQ01201 579 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 ARFRP1Q13795 201 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 GNMTQ14749 295 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 ARL6IP1Q15041 203 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 AWAT1Q58HT5 328 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 GPR107Q5VW38 600 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 CCDC144NLQ6NUI1 221 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 LINC00311Q8N616 119 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 C8orf31Q8N9H6 132 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 IL1F10Q8WWZ1 152 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 PHF21AQ96BD5 680 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 OCSTAMPQ9BR26 566 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 Q9N2K0 584 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 RAB18Q9NP72 206 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 PITPNC1Q9UKF7 332 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 SPATA2Q9UM82 520 aa9.95□□□□□ -0.82
SMAD3-205ENST00000558428 A6NDX4 124 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 POM121CA8CG34 1229 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 HSD17B6O14756 317 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 RGS11O94810 467 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 GABARAPO95166 117 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 NDUFA7O95182 113 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 MDKP21741 143 aaPredicted RBP9.94□□□□□ -0.82
SMAD3-205ENST00000558428 IL3RAP26951 378 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 PPP1CCP36873 323 aaKnown RBP9.94□□□□□ -0.82
SMAD3-205ENST00000558428 ZNF134P52741 427 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 DIAPH2-AS1Q14236 149 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 CDNFQ49AH0 187 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 MORN2Q502X0 79 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 CT45A1Q5HYN5 189 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 LIAT1Q6ZQX7 453 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 SLC25A48Q6ZT89 311 aaKnown RBP9.94□□□□□ -0.82
SMAD3-205ENST00000558428 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 ZNF439Q8NDP4 499 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 OR4F5Q8NH21 305 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 CT45A3Q8NHU0 189 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 SLC25A46Q96AG3 418 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 SLC25A38Q96DW6 304 aa9.94□□□□□ -0.82
SMAD3-205ENST00000558428 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 CHST1O43916 411 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 YPEL1O60688 119 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 FCGR3AP08637 254 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 SCTP09683 121 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 CD24P25063 80 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 TALDO1P37837 337 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 RAB7AP51149 207 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 CTF1Q16619 201 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 STEAP3Q658P3 488 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 CCBE1Q6UXH8 406 aaPredicted RBP9.93□□□□□ -0.82
SMAD3-205ENST00000558428 Q6ZSV7 163 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 OR8H3Q8N146 312 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 C3orf56Q8N813 242 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 MAFIPQ8WZ33 124 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 YPEL2Q96QA6 119 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 ABHD14AQ9BUJ0 271 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 BEX1Q9HBH7 125 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.93□□□□□ -0.827e-8■■■■□ 19.9
SMAD3-205ENST00000558428 SLC23A1Q9UHI7 598 aa9.93□□□□□ -0.82
SMAD3-205ENST00000558428 ELF5Q9UKW6 265 aaPredicted RBP9.93□□□□□ -0.82
SMAD3-205ENST00000558428 A0A1B0GUS0 222 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 A0A1W2PPI3 338 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 TMEM235A6NFC5 223 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 TRDCB7Z8K6 153 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 TIMM23O14925 209 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 HSPA12AO43301 675 aa9.92□□□□□ -0.82
SMAD3-205ENST00000558428 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms