RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 GPX5O75715 221 aa12.2□□□□□ -0.46
TPM1-211ENST00000558314 PPP1CCP36873 323 aaKnown RBP12.2□□□□□ -0.46
TPM1-211ENST00000558314 DGCR2P98153 550 aa12.2□□□□□ -0.46
TPM1-211ENST00000558314 MMDQ15546 238 aa12.2□□□□□ -0.46
TPM1-211ENST00000558314 C8orf31Q8N9H6 132 aa12.2□□□□□ -0.46
TPM1-211ENST00000558314 OR8U1Q8NH10 309 aa12.2□□□□□ -0.46
TPM1-211ENST00000558314 ST6GALNAC6Q969X2 333 aa12.2□□□□□ -0.46
TPM1-211ENST00000558314 DERL3Q96Q80 235 aa12.2□□□□□ -0.46
TPM1-211ENST00000558314 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM1-211ENST00000558314 RCC2Q9P258 522 aaKnown RBP12.2□□□□□ -0.46
TPM1-211ENST00000558314 TXNL1O43396 289 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 FUT3P21217 361 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 SLC6A1P30531 599 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 DOC2BQ14184 412 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 RCN1Q15293 331 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 TRAT1Q6PIZ9 186 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 C8orf59Q8N0T1 100 aaPredicted RBP12.19□□□□□ -0.46
TPM1-211ENST00000558314 ZNF439Q8NDP4 499 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 OR5M8Q8NGP6 311 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 SETD6Q8TBK2 473 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 MRPS24Q96EL2 167 aaKnown RBP12.19□□□□□ -0.46
TPM1-211ENST00000558314 OR5B12Q96R08 314 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 PRR25Q96S07 402 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 PLSCR3Q9NRY6 295 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 ZNF107Q9UII5 783 aaPredicted RBP12.19□□□□□ -0.46
TPM1-211ENST00000558314 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
TPM1-211ENST00000558314 ELANEP08246 267 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 GNAO1P09471 354 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 ECI1P42126 302 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 WNT4P56705 351 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 LSAMPQ13449 338 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 FOXE3Q13461 319 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 INSL4Q14641 139 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 OR10K2Q6IF99 312 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 ZNF485Q8NCK3 441 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 OR8H1Q8NGG4 311 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 IL1F10Q8WWZ1 152 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 Q96M66 194 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 KCTD7Q96MP8 289 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 NEDD4LQ96PU5 975 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 ZNF251Q9BRH9 671 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 ABHD14AQ9BUJ0 271 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 MRPL20Q9BYC9 149 aaKnown RBP12.18□□□□□ -0.46
TPM1-211ENST00000558314 CHMP1AQ9HD42 196 aaPredicted RBP12.18□□□□□ -0.46
TPM1-211ENST00000558314 PARP11Q9NR21 331 aa12.18□□□□□ -0.46
TPM1-211ENST00000558314 SEC14L6B5MCN3 397 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 H0YHG0 523 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 PDCD6O75340 191 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 LY86O95711 162 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 CNTFRP26992 372 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 MAPK3P27361 379 aaPredicted RBP12.17□□□□□ -0.46
TPM1-211ENST00000558314 OR3A3P47888 321 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
TPM1-211ENST00000558314 TMEM30BQ3MIR4 351 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 Q3ZCU0 254 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 MORN2Q502X0 79 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 TMEM65Q6PI78 240 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 PACRGLQ8N7B6 248 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 NKAIN3Q8N8D7 197 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 MRPL30Q8TCC3 161 aaKnown RBP12.17□□□□□ -0.46
TPM1-211ENST00000558314 B9D2Q9BPU9 175 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 TMED9Q9BVK6 235 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 CST11Q9H112 138 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 KCNK15Q9H427 330 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 ZMAT5Q9UDW3 170 aaKnown RBP12.17□□□□□ -0.46
TPM1-211ENST00000558314 ERGIC3Q9Y282 383 aa12.17□□□□□ -0.46
TPM1-211ENST00000558314 G3V318 75 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 LANCL1O43813 399 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 CA11O75493 328 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 VSIG8P0DPA2 414 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 CDX1P47902 265 aaPredicted RBP12.16□□□□□ -0.46
TPM1-211ENST00000558314 ACTBP60709 375 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 RBM48Q5RL73 367 aaKnown RBP12.16□□□□□ -0.46
TPM1-211ENST00000558314 FAM27D1Q5T7N8 215 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 OR11H1Q8NG94 326 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 RITA1Q96K30 269 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 FAAP24Q9BTP7 215 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 CNOT2Q9NZN8 540 aaKnown RBP12.16□□□□□ -0.46
TPM1-211ENST00000558314 PSORS1C1Q9UIG5 152 aa12.16□□□□□ -0.46
TPM1-211ENST00000558314 FAM90A10PA6NDY2 464 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 FAM90A7PA6NKC0 464 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 FAM90A23PA8MXZ1 464 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 ST8SIA5O15466 376 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 RGS11O94810 467 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 OR5H8P0DN80 308 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 ZNF137PP52743 207 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 GP2P55259 537 aaKnown RBP12.15□□□□□ -0.46
TPM1-211ENST00000558314 DCTN2Q13561 401 aaKnown RBP12.15□□□□□ -0.46
TPM1-211ENST00000558314 ZNF260Q3ZCT1 412 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 ACSM3Q53FZ2 586 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 C9orf66Q5T8R8 295 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 LAIR2Q6ISS4 152 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 C6orf201Q7Z4U5 140 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 CDH26Q8IXH8 852 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 OR2AK2Q8NG84 335 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 ABHD5Q8WTS1 349 aa12.15□□□□□ -0.46
TPM1-211ENST00000558314 GALMQ96C23 342 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms