RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GTF2BQ00403 316 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CDK5Q00535 292 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 RPL18AQ02543 176 aaKnown RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 BAMBIQ13145 260 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 MOBPQ13875 183 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 SNRNP35Q16560 246 aaKnown RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 TMEM183BQ1AE95 376 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 LRRC26Q2I0M4 334 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 PLPPR5Q32ZL2 321 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 ABCA11PQ4W5N1 156 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TNFAIP8L3Q5GJ75 292 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CT45A1Q5HYN5 189 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 VAX1Q5SQQ9 334 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TMEM78Q5T7P6 136 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TNFAIP8L2Q6P589 184 aaPredicted RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 DCUN1D2Q6PH85 259 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 IGFL1Q6UW32 110 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 SCIMPQ6UWF3 145 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TCF24Q7RTU0 167 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CALHM3Q86XJ0 350 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 PCP2Q8IVA1 136 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TMEM183AQ8IXX5 376 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 NALCNQ8IZF0 1738 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 DAW1Q8N136 415 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 GAPTQ8N292 157 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 OR9I1Q8NGQ6 314 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 OR4K15Q8NH41 348 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CT45A3Q8NHU0 189 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 FRZBQ92765 325 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 DIRAS2Q96HU8 199 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 PYURFQ96I23 114 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 BMFQ96LC9 184 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 OR52B2Q96RD2 323 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 ZNF382Q96SR6 550 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 SERPINI1Q99574 410 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 SETD5Q9C0A6 1442 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 COA1Q9GZY4 146 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 SRMSQ9H3Y6 488 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 FAM96AQ9H5X1 160 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 VSIRQ9H7M9 311 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 KCNJ16Q9NPI9 418 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TMEM9BQ9NQ34 198 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 NIT2Q9NQR4 276 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 IDI2-AS1Q9NZ38 188 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 COMMD9Q9P000 198 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 COPZ2Q9P299 210 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 GNG8Q9UK08 70 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 PKIGQ9Y2B9 76 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 DYSFO75923 2080 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 LRP4O75096 1905 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 DICER1Q9UPY3 1922 aaKnown RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 ITGB4P16144 1822 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 PALLDQ8WX93 1383 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 PHLPP1O60346 1717 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 NUP214P35658 2090 aaPredicted RBP1.86□□□□□ -2.11
SPG11-206ENST00000558093 IGHV2OR16-5A0A0B4J2B6 119 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 A0A1W2PRE2 83 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 MAP1LC3B2A6NCE7 125 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 BTNL10A8MVZ5 291 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 H7C1H1 209 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 K7EQS6 105 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 SLC22A1O15245 554 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 GYG2O15488 501 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 CHST10O43529 356 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 ZNF207O43670 478 aaKnown RBP1.86□□□□□ -2.11
SPG11-206ENST00000558093 C6orf47O95873 294 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 HPRT1P00492 218 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 IGKV1D-16P01601 117 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 CRYGDP07320 174 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 ZNF806P0C7X5 589 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 PGA4P0DJD7 388 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 PGA3P0DJD8 388 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 SULT1A3P0DMM9 295 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 SULT1A4P0DMN0 295 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 CD37P11049 281 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 TDGF1P13385 188 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 ZNF708P17019 499 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 GPX2P18283 190 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 CXCL3P19876 107 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 CD34P28906 385 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 GZMMP51124 257 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 RORCP51449 518 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 TDGF1P3P51864 188 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 RND2P52198 227 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 MAXP61244 160 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 TBPL1P62380 186 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 EMX2Q04743 252 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 TCP10Q12799 353 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 ZNF266Q14584 549 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 GINS1Q14691 196 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 NEDD8Q15843 81 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 UBE2SQ16763 222 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 RNASE10Q5GAN6 216 aaKnown RBP1.86□□□□□ -2.11
SPG11-206ENST00000558093 TMEM255AQ5JRV8 349 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 OR2T5Q6IEZ7 315 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 OPN5Q6U736 354 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 PLET1Q6UQ28 207 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 MRPL55Q7Z7F7 128 aaKnown RBP1.86□□□□□ -2.11
SPG11-206ENST00000558093 TMEM150AQ86TG1 271 aa1.86□□□□□ -2.11
SPG11-206ENST00000558093 OAFQ86UD1 273 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms