RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 NFYBP25208 207 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 IL3RAP26951 378 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 ETV6P41212 452 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 RAB7AP51149 207 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 ARHGDIBP52566 201 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 ACTBP60709 375 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 ACTG1P63261 375 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 OR1L1Q8NH94 360 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 RFESDQ8TAC1 157 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 GPX8Q8TED1 209 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 MALSU1Q96EH3 234 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 JMJD8Q96S16 334 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 IFT46Q9NQC8 304 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 TRAV39A0A0B4J263 110 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 GABARAPH6UMI1 98 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 J3QR06 171 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 HSPA12AO43301 675 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 SSX5O60225 188 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 MMP23AO75900 390 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 IFNA2P01563 188 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 TBPP20226 339 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 OMGP23515 440 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 HTR1DP28221 377 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 TNFSF8P32971 234 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 TAS2R46P59540 309 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 HLA-DRB5Q30154 266 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 MORN2Q502X0 79 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 SPANXN2Q5MJ10 180 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 CCDC144NLQ6NUI1 221 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 BEST4Q8NFU0 473 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 MMP28Q9H239 520 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 PTTG2Q9NZH5 202 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 DPM3Q9P2X0 92 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 ANXA10Q9UJ72 324 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
SUPT16H-208ENST00000557652 TRBV6-7A0A0A0MS04 114 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 FABP12A6NFH5 140 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 LEUTXA8MZ59 168 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 TXNL1O43396 289 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 ARG1P05089 322 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 COX7A1P24310 79 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 RCVRNP35243 200 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 SAA4P35542 130 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 GDNFP39905 211 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 ZNF137PP52743 207 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 IL18Q14116 193 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 ACTBL2Q562R1 376 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 RBMS3Q6XE24 437 aaKnown RBP11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 Q6ZPA2 131 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 SLC25A48Q6ZT89 311 aaKnown RBP11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 IZUMO1Q8IYV9 350 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 PRR18Q8N4B5 295 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 OR2AK2Q8NG84 335 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 OR4P4Q8NGL7 312 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 OR6Q1Q8NGQ2 317 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 OR10J5Q8NHC4 309 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 FCAMRQ8WWV6 532 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 IL1F10Q8WWZ1 152 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 SOSTQ9BQB4 213 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 ST6GALNAC5Q9BVH7 336 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 TAS2R8Q9NYW2 309 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 ZNF69Q9UC07 566 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 SLC23A1Q9UHI7 598 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 PSG11Q9UQ72 335 aa11.48□□□□□ -0.57
SUPT16H-208ENST00000557652 JMJD1CQ15652 2540 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 MEX3AA1L020 520 aaKnown RBP11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 MEIOCA2RUB1 952 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 GSTZ1O43708 216 aaPredicted RBP11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 RBBP9O75884 186 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 SCTP09683 121 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 DYNLT3P51808 116 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 ARPC4P59998 168 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 KLRD1Q13241 179 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 MADCAM1Q13477 382 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 CCDC190Q86UF4 302 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 SNX29P2Q8IUI4 249 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 TMEM86BQ8N661 226 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 ZNF439Q8NDP4 499 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 OR5AP2Q8NGF4 316 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 OR10X1Q8NGY0 326 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 SMIM4Q8WVI0 70 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 DEDD2Q8WXF8 326 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 NECAP2Q9NVZ3 263 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 MTFP1Q9UDX5 166 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 ZNF230Q9UIE0 474 aaPredicted RBP11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 ELF5Q9UKW6 265 aaPredicted RBP11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 C2CD3Q4AC94 2353 aa11.47□□□□□ -0.57
SUPT16H-208ENST00000557652 NIPBLQ6KC79 2804 aaeCLIP11.46□□□□□ -0.57
SUPT16H-208ENST00000557652 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.57
SUPT16H-208ENST00000557652 VGLL3A8MV65 326 aa11.46□□□□□ -0.57
SUPT16H-208ENST00000557652 BUB1B-PAK6H3BSN5 160 aa11.46□□□□□ -0.57
SUPT16H-208ENST00000557652 SLC22A5O76082 557 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms