RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NUDT10Q8NFP7 164 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 OR8J1Q8NGP2 316 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 NUDT11Q96G61 164 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 RCHY1Q96PM5 261 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 TEAD3Q99594 435 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 NEURL2Q9BR09 285 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 CHST6Q9GZX3 395 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 PBOV1Q9GZY1 135 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 TMEM231Q9H6L2 316 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 GPR173Q9NS66 373 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 DPM3Q9P2X0 92 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 RSL24D1Q9UHA3 163 aaKnown RBP4.6□□□□□ -1.67
VPS33B-207ENST00000557470 LINC00527Q9UJ94 153 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ENPP5Q9UJA9 477 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 HHLA2Q9UM44 414 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
VPS33B-207ENST00000557470 MOB4Q9Y3A3 225 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 HSPE1-MOB4S4R3N1 261 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ARRDC5A6NEK1 342 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 HELTA6NFD8 242 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 A6NIN4 97 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 LEUTXA8MZ59 168 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 PRR32B1ATL7 298 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 FAM25AB3EWG3 89 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 FAM25CB3EWG5 89 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 FAM25GB3EWG6 89 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF701M0R085 212 aaPredicted RBP4.59□□□□□ -1.67
VPS33B-207ENST00000557470 CCL24O00175 119 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 DLGAP1O14490 977 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 CLN5O75503 358 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 DHRS3O75911 302 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 IGLV1-47P01700 117 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ALOX5APP20292 161 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 TSPAN5P62079 268 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 RPS7P62081 194 aaKnown RBP4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ESRRGP62508 458 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 COTL1Q14019 142 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 GRK1Q15835 563 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 PNLIPRP3Q17RR3 467 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 DEFB136Q30KP8 78 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 CD300EQ496F6 205 aaPredicted RBP4.59□□□□□ -1.67
VPS33B-207ENST00000557470 UTF1Q5T230 341 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 TPTE2P1Q5T6R2 138 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 LCN1P1Q5VSP4 162 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ZFAND6Q6FIF0 208 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 TRAPPC6BQ86SZ2 158 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 SBSPONQ8IVN8 264 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ADGRG5Q8IZF4 528 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 BBS1Q8NFJ9 593 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 OR52N4Q8NGI2 321 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 TRMT10AQ8TBZ6 339 aaKnown RBP4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF596Q8TC21 504 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 FAM46BQ96A09 425 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 NEU1Q99519 415 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 FEVQ99581 238 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ATG101Q9BSB4 218 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ABHD14AQ9BUJ0 271 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 DGCR6LQ9BY27 220 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 MRPS26Q9BYN8 205 aaKnown RBP4.59□□□□□ -1.67
VPS33B-207ENST00000557470 TTTY10Q9BZA0 68 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 Q9H521 79 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ZFP57Q9NU63 452 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 MTCH1Q9NZJ7 389 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 IL36RNQ9UBH0 155 aa4.59□□□□□ -1.67
VPS33B-207ENST00000557470 NUFIP1Q9UHK0 495 aaKnown RBP4.59□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF256Q9Y2P7 627 aaPredicted RBP4.59□□□□□ -1.67
VPS33B-207ENST00000557470 IGKV1-27A0A075B6S5 117 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 A0A1W2PN81 502 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 SERPINE3A8MV23 424 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 SEC14L6B5MCN3 397 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 PRR23D1E9PI22 279 aaPredicted RBP4.58□□□□□ -1.68
VPS33B-207ENST00000557470 H3BNX3 289 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 LY6LH3BQJ8 138 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 BUB1B-PAK6H3BSN5 160 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 CCDC22O60826 627 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 DCTN3O75935 186 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 HAND1O96004 215 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 MBPP02686 304 aaPredicted RBP4.58□□□□□ -1.68
VPS33B-207ENST00000557470 TTRP02766 147 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 PRR23D2P0DMB1 279 aaPredicted RBP4.58□□□□□ -1.68
VPS33B-207ENST00000557470 HSD17B1P14061 328 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 GABRR1P24046 479 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 CDK2P24941 298 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 PRDX6P30041 224 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 CHRNA7P36544 502 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 MAGEA2P43356 314 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 OR3A1P47881 315 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 RAB4BP61018 213 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 RBM39Q14498 530 aaKnown RBP4.58□□□□□ -1.68
VPS33B-207ENST00000557470 MICAQ29983 383 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 HLA-DRB5Q30154 266 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 C9orf66Q5T8R8 295 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 HEPN1Q6WQI6 88 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 ADAMTSL5Q6ZMM2 481 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 NRARPQ7Z6K4 114 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 LINC00518Q8N0U6 118 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 COMMD1Q8N668 190 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 C5orf56Q8N8D9 126 aa4.58□□□□□ -1.68
VPS33B-207ENST00000557470 SYT8Q8NBV8 401 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms