RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SLC35F2Q8IXU6 374 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ZNF679Q8IYX0 411 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TMEM123Q8N131 208 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR6V1Q8N148 313 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CCDC54Q8NEL0 328 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 SDR9C7Q8NEX9 313 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 SLC26A10Q8NG04 563 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR4F15Q8NGB8 312 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR9K2Q8NGE7 335 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR4K13Q8NH42 304 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR2V1Q8NHB1 315 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OTOSQ8NHW6 89 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 NEIL3Q8TAT5 605 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 DYNC2LI1Q8TCX1 351 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RDH5Q92781 318 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 UFD1Q92890 307 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TMEM54Q969K7 222 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RASD2Q96D21 266 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PELI1Q96FA3 418 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PGLYRP3Q96LB9 341 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ZFP3Q96NJ6 502 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RBP7Q96R05 134 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR8B4Q96RC9 309 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 NMNAT3Q96T66 252 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TSC22D3Q99576 134 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ZNF416Q9BWM5 594 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TTTY12Q9BZ98 90 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 LINC00470Q9BZP3 86 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR11A1Q9GZK7 315 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 SLIRPQ9GZT3 109 aaKnown RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 CCDC90BQ9GZT6 254 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 SYT4Q9H2B2 425 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 MRPL22Q9NWU5 206 aaKnown RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 BABAM2Q9NXR7 383 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 EMC3Q9P0I2 261 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR1A1Q9P1Q5 309 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RABL2AQ9UBK7 228 aaPredicted RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 CLEC2DQ9UHP7 191 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ZNF391Q9UJN7 358 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 NPIPA1Q9UND3 350 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RABL2BQ9UNT1 228 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 B9D1Q9UPM9 204 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 GSTK1Q9Y2Q3 226 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 MRPS18BQ9Y676 258 aaKnown RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 PKDREJQ9NTG1 2253 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 USP24Q9UPU5 2620 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 LAMA5O15230 3695 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 DYSFO75923 2080 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 A0A0J9YW62 118 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 PNMA8CA0A1B0GUJ8 204 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 DAPL1A0PJW8 107 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 METTL15A6NJ78 407 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ARGFXA6NJG6 315 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 MKRN2OSH3BPM6 223 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 DCTN6O00399 190 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 FCN1O00602 326 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 UPK3AO75631 287 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ARL6IP5O75915 188 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CLPXO76031 633 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 DIRAS3O95661 229 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 LALBAP00709 142 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 IGLV3-1P01715 115 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 APOC1P02654 83 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 KRT8P05787 483 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CRHP06850 196 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 UCHL1P09936 223 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 OR8U8P0C7N1 319 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 COX5BP10606 129 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CD37P11049 281 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ZNF24P17028 368 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 MSR1P21757 451 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 GADD45AP24522 165 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 LAP3P28838 519 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CD40LGP29965 261 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 SOX6P35712 828 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 KIR2DS2P43631 304 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 MAP2K4P45985 399 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CSNK1A1P48729 337 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 PSMD7P51665 324 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 GBX2P52951 348 aaPredicted RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 BIDP55957 195 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CARD18P57730 90 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 OR2B6P58173 313 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 GRB2P62993 217 aaKnown RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 HIST1H3AP68431 136 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ARG2P78540 354 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 PAX5Q02548 391 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ECH1Q13011 328 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 AQP6Q13520 282 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 GUSBP1Q15486 140 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 MOGQ16653 247 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 DGUOKQ16854 277 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ZNF829Q3KNS6 432 aaPredicted RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 KLHL12Q53G59 568 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 TMEM41BQ5BJD5 291 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 FAM120AOSQ5T036 256 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 HIST2H3PS2Q5TEC6 136 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 OR2G6Q5TZ20 316 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 FAM27BQ5VT28 67 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 HBMQ6B0K9 141 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms