RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 C1orf123Q9NWV4 160 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 JKAMPQ9P055 326 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 Q9UFV3 132 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 APC2O95996 2303 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 EPG5Q9HCE0 2579 aa10.72□□□□□ -0.69
SHMT2-229ENST00000557348 IGKV1D-8A0A087WSZ0 117 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 PTBP3O95758 552 aaKnown RBP10.71□□□□□ -0.69
SHMT2-229ENST00000557348 IFNA2P01563 188 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 FAM87AP0C7U9 286 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 CD80P33681 288 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 FABP6P51161 128 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 SMIM21Q3B7S5 101 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 OR2B11Q5JQS5 317 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 MYO7BQ6PIF6 2116 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 CLEC18BQ6UXF7 455 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 RBMS3Q6XE24 437 aaKnown RBP10.71□□□□□ -0.69
SHMT2-229ENST00000557348 WDR86Q86TI4 376 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 FAM90A1Q86YD7 464 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 FAM71E2Q8N5Q1 922 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 CASTOR1Q8WTX7 329 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 RND1Q92730 232 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 HIPK2Q9H2X6 1198 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 GFOD1Q9NXC2 390 aa10.71□□□□□ -0.69
SHMT2-229ENST00000557348 GAR1Q9NY12 217 aaKnown RBP10.71□□□□□ -0.69
SHMT2-229ENST00000557348 CACNA1BQ00975 2339 aa10.71□□□□□ -0.7
SHMT2-229ENST00000557348 AKAP13Q12802 2813 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 C13orf42A0A1B0GVH6 325 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 CRYM-AS1A6NIL9 109 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 H0YIZ8 118 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 IFNL4K9M1U5 179 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 CDIPTO14735 213 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 RHBDL1O75783 438 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 DANCRP0C864 163 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 S100GP29377 79 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 FCGR2CP31995 323 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 LPAR6P43657 344 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 NKX6-1P78426 367 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-229ENST00000557348 SRPXP78539 464 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 ALKBH6Q3KRA9 238 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 AWAT1Q58HT5 328 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 Q6P435 159 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 ZNF880Q6PDB4 577 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 NUP37Q8NFH4 326 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 PRR7Q8TB68 274 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 TMEM230Q96A57 120 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 RRNAD1Q96FB5 475 aaKnown RBP10.7□□□□□ -0.7
SHMT2-229ENST00000557348 GALNT14Q96FL9 552 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 PFDN5Q99471 154 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 SUCNR1Q9BXA5 334 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 SLC35B3Q9H1N7 401 aa10.7□□□□□ -0.7
SHMT2-229ENST00000557348 URB1O60287 2271 aaKnown RBP10.7□□□□□ -0.7
SHMT2-229ENST00000557348 IGLV3-9A0A075B6K5 115 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 TRAV24A0A0B4J272 114 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 VSTM5A8MXK1 200 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 NPIPB11E5RHQ5 1161 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 MLNRO43193 412 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 KNG1P01042 644 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 GRPP07492 148 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 HIST1H1BP16401 226 aaKnown RBP10.69□□□□□ -0.7
SHMT2-229ENST00000557348 CFHR2P36980 270 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 GAPTQ8N292 157 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 BOLLQ8N9W6 283 aaKnown RBP10.69□□□□□ -0.7
SHMT2-229ENST00000557348 KCNJ16Q9NPI9 418 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 ZNF581Q9P0T4 197 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 FREM2Q5SZK8 3169 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 IGF2RP11717 2491 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 USP24Q9UPU5 2620 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 FAM221AA4D161 298 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 A6NLC8 198 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 B4DEV8 164 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 K7EPK0 472 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 OR2H2O95918 312 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 PPYP01298 95 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 IFNA21P01568 189 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 GLRA1P23415 457 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 LMO1P25800 156 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 CEACAM6P40199 344 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 SULT1A1P50225 295 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 HLA-DRB3P79483 266 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 PDCD1Q15116 288 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 GUK1Q16774 197 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 BRICD5Q6PL45 260 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 HEPN1Q6WQI6 88 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 Q6ZRG5 221 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 MRPL30Q8TCC3 161 aaKnown RBP10.69□□□□□ -0.7
SHMT2-229ENST00000557348 ZCCHC14Q8WYQ9 949 aaKnown RBP10.69□□□□□ -0.7
SHMT2-229ENST00000557348 DYRK2Q92630 601 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 AKR1E2Q96JD6 320 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 ZNF488Q96MN9 340 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 CABLES2Q9BTV7 478 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 RSRP1Q9BUV0 290 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 IL36RNQ9UBH0 155 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 FRYQ5TBA9 3013 aa10.69□□□□□ -0.7
SHMT2-229ENST00000557348 ACACAQ13085 2346 aa10.68□□□□□ -0.7
SHMT2-229ENST00000557348 E5RGE8 158 aa10.68□□□□□ -0.7
SHMT2-229ENST00000557348 SLC33A1O00400 549 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-229ENST00000557348 HS3ST1O14792 307 aa10.68□□□□□ -0.7
SHMT2-229ENST00000557348 HAND1O96004 215 aa10.68□□□□□ -0.7
SHMT2-229ENST00000557348 RPS2P15880 293 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms