RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 DHPSP49366 369 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SULT1A1P50225 295 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 EFNA3P52797 238 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 GFERP55789 205 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 TMEM50BP56557 158 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 FMODQ06828 376 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF616Q08AN1 781 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 KIAA0141Q14154 515 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF266Q14584 549 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 GNMTQ14749 295 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 MS4A18Q3C1V0 323 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ABCA11PQ4W5N1 156 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SOHLH1Q5JUK2 328 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 HIST2H3PS2Q5TEC6 136 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 OR2A2Q6IF42 318 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 LCN10Q6JVE6 187 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 DPPA3Q6W0C5 159 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 RBMS3Q6XE24 437 aaKnown RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SLC16A14Q7RTX9 510 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 C9orf40Q8IXQ3 194 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 PRR22Q8IZ63 422 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 LGI3Q8N145 548 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 CIARTQ8N365 385 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 METTL27Q8N6F8 245 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF321PQ8N8H1 164 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 LRTM2Q8N967 370 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 CCDC71LQ8N9Z2 235 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 TMEM104Q8NE00 496 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 NOXO1Q8NFA2 376 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 OR8B12Q8NGG6 310 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 OR13D1Q8NGV5 346 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 CD300LFQ8TDQ1 290 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 LMX1AQ8TE12 382 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SSC4DQ8WTU2 575 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 PP6455Q8WZ26 134 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ROBO4Q8WZ75 1007 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 GALNT14Q96FL9 552 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ARHGAP5-AS1Q96IT6 56 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 PFDN5Q99471 154 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SPIN2AQ99865 258 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SPIN2BQ9BPZ2 258 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 KLHDC3Q9BQ90 382 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 NAA11Q9BSU3 229 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ST6GALNAC5Q9BVH7 336 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 PAPOLGQ9BWT3 736 aaKnown RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 OR11A1Q9GZK7 315 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 RAB33BQ9H082 229 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 GPR84Q9NQS5 396 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SDHAF3Q9NRP4 125 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 NECAP2Q9NVZ3 263 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 HDGFL3Q9Y3E1 203 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 LSM5Q9Y4Y9 91 aaKnown RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 VPS13AQ96RL7 3174 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 GOLGA4Q13439 2230 aaKnown RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 CFAP47Q6ZTR5 3102 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 LOC102723996A0A087X1L8 192 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 NSG1A0A0A6YYJ2 146 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 LOC101059948A0A1B0GTJ6 334 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 LOC102725191A0A1B0GVB3 256 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 DUXBA0A1W2PPF3 345 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 FAM230AA0A1W2PPH8 454 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 LNP1A1A4G5 178 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 DHRS7CA6NNS2 312 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 FOXI3A8MTJ6 420 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 C9JQL5 133 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SDCBPO00560 298 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ST8SIA3O43173 380 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 PPIHO43447 177 aaKnown RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 NME2P1O60361 137 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 PITX3O75364 302 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 RAD51DO75771 328 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 CDS2O95674 445 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 HPNP05981 417 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF728P0DKX0 622 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 OR5H8P0DN80 308 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 CBR1P16152 277 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SFTPDP35247 375 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 HAAOP46952 286 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 OR3A4PP47883 348 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 BIDP55957 195 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF121P58317 390 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 LSM6P62312 80 aaKnown RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 DEFA6Q01524 100 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 IL11RAQ14626 422 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM187Q14656 261 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 OR8B8Q15620 311 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 KISS1Q15726 138 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF239Q16600 458 aaKnown RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 DEFB133Q30KQ1 61 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 C14orf28Q4W4Y0 310 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 HIKESHIQ53FT3 197 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-246ENST00000557030 KRTCAP3Q53RY4 240 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SLC25A53Q5H9E4 307 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 OR2B11Q5JQS5 317 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 OTPQ5XKR4 325 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 ADAM5Q6NVV9 412 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 SLC25A47Q6Q0C1 308 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 PLXDC2Q6UX71 529 aa3.96□□□□□ -1.78
ATXN3-246ENST00000557030 HEPN1Q6WQI6 88 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms