RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CMSS1Q9BQ75 279 aaKnown RBP8.6□□□□□ -1.03
LINC00239-201ENST00000556973 PECRQ9BY49 303 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 ATG5Q9H1Y0 275 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 RNF167Q9H6Y7 350 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 OR2S2Q9NQN1 319 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 ABRACLQ9P1F3 81 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 GNG12Q9UBI6 72 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 DAPK2Q9UIK4 370 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 MGAT4AQ9UM21 535 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 A0A1W2PPE3 182 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 RAB27BO00194 218 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 YPEL1O60688 119 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 RGS11O94810 467 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 GAPDHP04406 335 aaKnown RBP8.59□□□□□ -1.03
LINC00239-201ENST00000556973 FAM106CPP0CH98 169 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 KIR2DS4P43632 304 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 SCAND1P57086 179 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 ARL6IP1Q15041 203 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 HMGN3Q15651 99 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 MOGAT2Q3SYC2 334 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 SLC25A48Q6ZT89 311 aaKnown RBP8.59□□□□□ -1.03
LINC00239-201ENST00000556973 MOB1BQ7L9L4 216 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 C16orf82Q7Z2V1 217 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 THNSL2Q86YJ6 484 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 CROCCP3Q8IVE0 287 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 OR8H3Q8N146 312 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 SETD6Q8TBK2 473 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 TOMM40LQ969M1 308 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 YPEL2Q96QA6 119 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 RANBP3Q9H6Z4 567 aaPredicted RBP8.59□□□□□ -1.03
LINC00239-201ENST00000556973 JPT1Q9UK76 154 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 RNF114Q9Y508 228 aa8.59□□□□□ -1.03
LINC00239-201ENST00000556973 A0A0B4J203 849 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 HAX1O00165 279 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 SCGNO76038 276 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 LPLP06858 475 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 CLEC2LP0C7M8 214 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 IL3RAP26951 378 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 ZNF134P52741 427 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 MRPS15P82914 257 aaKnown RBP8.58□□□□□ -1.04
LINC00239-201ENST00000556973 ZNF816Q0VGE8 651 aaPredicted RBP8.58□□□□□ -1.04
LINC00239-201ENST00000556973 CT45A1Q5HYN5 189 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 FAM53AQ6NSI3 398 aaPredicted RBP8.58□□□□□ -1.04
LINC00239-201ENST00000556973 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 ZNF439Q8NDP4 499 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 OR52L2PQ8NGH6 319 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 OR10V1Q8NGI7 309 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 OR4C13Q8NGP0 309 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 CT45A3Q8NHU0 189 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 ST6GALNAC6Q969X2 333 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 AKR1E2Q96JD6 320 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 NPFFR1Q9GZQ6 430 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 Q9N2K0 584 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 C12orf4Q9NQ89 552 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 KCNK7Q9Y2U2 307 aa8.58□□□□□ -1.04
LINC00239-201ENST00000556973 FAM90A9PA6NNJ1 464 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 SERPINE3A8MV23 424 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 MFNGO00587 321 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 TIMM23O14925 209 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 CHST1O43916 411 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 CD3GP09693 182 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 SNRPBP14678 240 aaKnown RBP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 HIST1H1DP16402 221 aaKnown RBP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 GNB3P16520 340 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 CD24P25063 80 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 RPS19P39019 145 aaKnown RBP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 ZNF137PP52743 207 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 PROK1P58294 105 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 LSM3P62310 102 aaKnown RBP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 DIAPH2-AS1Q14236 149 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 IDNKQ5T6J7 187 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 C11orf88Q6PI97 169 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 Q6ZPA2 131 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 C5orf24Q7Z6I8 188 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 OR13F1Q8NGS4 319 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 OR2T6Q8NHC8 308 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 CAPSLQ8WWF8 208 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 IL1F10Q8WWZ1 152 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 RBM14Q96PK6 669 aaKnown RBP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 HDHD3Q9BSH5 251 aaPredicted RBP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 FUNDC2Q9BWH2 189 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 MRPS26Q9BYN8 205 aaKnown RBP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 PRSS22Q9GZN4 317 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC00239-201ENST00000556973 ETV7Q9Y603 341 aa8.57□□□□□ -1.04
LINC00239-201ENST00000556973 IGHV1-3A0A0C4DH29 117 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 A0A1W2PPI3 338 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 TRDCB7Z8K6 153 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 HSD17B6O14756 317 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 SLC31A2O15432 143 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 TXNL1O43396 289 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 OR2F2O95006 317 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 SCTP09683 121 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 SMIM18P0DKX4 95 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 ZBTB25P24278 435 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 PPP1CCP36873 323 aaKnown RBP8.56□□□□□ -1.04
LINC00239-201ENST00000556973 TGFBR1P36897 503 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 TALDO1P37837 337 aa8.56□□□□□ -1.04
LINC00239-201ENST00000556973 ARFRP1Q13795 201 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms