RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 NKAIN3Q8N8D7 197 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 KLHL30-AS1Q8NEE0 82 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 OR1L1Q8NH94 360 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 RTN4IP1Q8WWV3 396 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-213ENST00000556846 THRSPQ92748 146 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 TFAP2CQ92754 450 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 PGLYRP3Q96LB9 341 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 NEDD4LQ96PU5 975 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 DERL3Q96Q80 235 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 GPR61Q9BZJ8 451 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 CST11Q9H112 138 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 TAF9BQ9HBM6 251 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 OR2S2Q9NQN1 319 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 ZFP57Q9NU63 452 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 LIN7CQ9NUP9 197 aaKnown RBP5.68□□□□□ -1.5
PCNX1-213ENST00000556846 CNOT2Q9NZN8 540 aaKnown RBP5.68□□□□□ -1.5
PCNX1-213ENST00000556846 PSORS1C1Q9UIG5 152 aa5.68□□□□□ -1.5
PCNX1-213ENST00000556846 MEGF8Q7Z7M0 2845 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 TRBV5-7A0A0A0MS05 114 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 FAM90A10PA6NDY2 464 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 FAM90A7PA6NKC0 464 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 LINC01548A6NM66 108 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 FAM90A23PA8MXZ1 464 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 AP4M1O00189 453 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 SLC31A2O15432 143 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 TXNL1O43396 289 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 CA11O75493 328 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 IGHG2P01859 326 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 GLAP06280 429 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 GNAO1P09471 354 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 RCC1P18754 421 aaPredicted RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 VDAC1P21796 283 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 HOXD3P31249 432 aaPredicted RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 MYCNOSP40205 109 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 VHLP40337 213 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 GPR12P47775 334 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 GABPB1Q06547 395 aaPredicted RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 GPR50Q13585 617 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 EBI3Q14213 229 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 TMEM30BQ3MIR4 351 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 Q3ZCU0 254 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 ACSM3Q53FZ2 586 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 CT45A1Q5HYN5 189 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 CXorf66Q5JRM2 361 aaPredicted RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 SLC25A48Q6ZT89 311 aaKnown RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 OR2W3Q7Z3T1 314 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 ZNF695Q8IW36 515 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 MRPL41Q8IXM3 137 aaKnown RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 IZUMO1Q8IYV9 350 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 STPG2Q8N412 459 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 NANOGP1Q8N7R0 232 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 ZNF485Q8NCK3 441 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 TMEM104Q8NE00 496 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 OR8H1Q8NGG4 311 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 OR52L2PQ8NGH6 319 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 CT45A3Q8NHU0 189 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 GALMQ96C23 342 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 S1PR3Q99500 378 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 UQCC2Q9BRT2 126 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 MCRIP2Q9BUT9 160 aaKnown RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 TMED9Q9BVK6 235 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 ABCG5Q9H222 651 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 CHMP1AQ9HD42 196 aaPredicted RBP5.67□□□□□ -1.5
PCNX1-213ENST00000556846 PLCXD1Q9NUJ7 323 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 SCN3BQ9NY72 215 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 ABRACLQ9P1F3 81 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 GHRLQ9UBU3 117 aa5.67□□□□□ -1.5
PCNX1-213ENST00000556846 ZNF736B4DX44 427 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-213ENST00000556846 H0YHG0 523 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 PDCD6O75340 191 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 RGS11O94810 467 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 CD1AP06126 327 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 UBBP0CG47 229 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 SLC6A1P30531 599 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 SOX6P35712 828 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 THBS3P49746 956 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 ZNF134P52741 427 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 MED22Q15528 200 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 MMDQ15546 238 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 MORN2Q502X0 79 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 RBM48Q5RL73 367 aaKnown RBP5.66□□□□□ -1.5
PCNX1-213ENST00000556846 OGFRL1Q5TC84 451 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-213ENST00000556846 STEAP3Q658P3 488 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 TMEM65Q6PI78 240 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 C18orf65Q6ZTR6 163 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 CEACAM19Q7Z692 300 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 MS4A15Q8N5U1 240 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 LINC00482Q8N8I6 264 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 Q8N9W7 124 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 SETD6Q8TBK2 473 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 IL1F10Q8WWZ1 152 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 Q96M66 194 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 DUX3Q96PT4 197 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 ZNF251Q9BRH9 671 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 FAAP24Q9BTP7 215 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 MND1Q9BWT6 205 aa5.66□□□□□ -1.5
PCNX1-213ENST00000556846 RCC2Q9P258 522 aaKnown RBP5.66□□□□□ -1.5
PCNX1-213ENST00000556846 ZMAT5Q9UDW3 170 aaKnown RBP5.66□□□□□ -1.5
PCNX1-213ENST00000556846 STEAP1Q9UHE8 339 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms