RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 MRPS28Q9Y2Q9 187 aaKnown RBP11.49□□□□□ -0.57
CHD8-211ENST00000556833 SMAD5-AS1Q9Y6J3 95 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 A3GALT2U3KPV4 340 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 TRAV8-7A0A075B6U6 113 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 MCRIP1C9JLW8 97 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 LALBAP00709 142 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 OR8U8P0C7N1 319 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 GTF2F2P13984 249 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 BLVRBP30043 206 aaPredicted RBP11.48□□□□□ -0.57
CHD8-211ENST00000556833 PPP1CCP36873 323 aaKnown RBP11.48□□□□□ -0.57
CHD8-211ENST00000556833 ACTBP60709 375 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 ZNF616Q08AN1 781 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 RPL22L1Q6P5R6 122 aaKnown RBP11.48□□□□□ -0.57
CHD8-211ENST00000556833 GLIPR1L1Q6UWM5 242 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 LINC00596Q86U02 117 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 HAPLN4Q86UW8 402 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 ZNF491Q8N8L2 437 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 MUC7Q8TAX7 377 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 VSIG4Q9Y279 399 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 RPL36Q9Y3U8 105 aaKnown RBP11.48□□□□□ -0.57
CHD8-211ENST00000556833 PEX16Q9Y5Y5 336 aa11.48□□□□□ -0.57
CHD8-211ENST00000556833 LOC100130705A0A1B0GUX0 176 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 I3L521 148 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 TXNL1O43396 289 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 IGF1P05019 195 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 SPNP16150 400 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 CHATP28329 748 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 OR3A3P47888 321 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 KIAA0141Q14154 515 aaPredicted RBP11.47□□□□□ -0.57
CHD8-211ENST00000556833 SRSF7Q16629 238 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD8-211ENST00000556833 KLHL22Q53GT1 634 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 CASC10Q5T4H9 136 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 C6orf183Q5T699 404 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 AWAT2Q6E213 333 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 C8orf31Q8N9H6 132 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 OR8H1Q8NGG4 311 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 FAM46BQ96A09 425 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 ANKRD60Q9BZ19 345 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 SELENOIQ9C0D9 397 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 TAF9BQ9HBM6 251 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 OR2S2Q9NQN1 319 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 PAK1IP1Q9NWT1 392 aaPredicted RBP11.47□□□□□ -0.57
CHD8-211ENST00000556833 CLEC2DQ9UHP7 191 aa11.47□□□□□ -0.57
CHD8-211ENST00000556833 IGHV7-81A0A0B4J1V7 117 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 TRAV41A0A0B4J266 112 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 OVOL1O14753 267 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 CRTAPO75718 401 aaPredicted RBP11.46□□□□□ -0.57
CHD8-211ENST00000556833 ATP5HO75947 161 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 MAS1P04201 325 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 FRMD6-AS1P0C7T7 363 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 OR5H8P0DN80 308 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 IGFBP3P17936 291 aaPredicted RBP11.46□□□□□ -0.57
CHD8-211ENST00000556833 PPIFP30405 207 aaKnown RBP11.46□□□□□ -0.57
CHD8-211ENST00000556833 NDPQ00604 133 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 FAM27D1Q5T7N8 215 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 MYOZ3Q8TDC0 251 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 ABHD5Q8WTS1 349 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 ARPC1AQ92747 370 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 GHSRQ92847 366 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 DLX4Q92988 240 aaPredicted RBP11.46□□□□□ -0.57
CHD8-211ENST00000556833 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 OR14A2Q96R54 314 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 ZNF251Q9BRH9 671 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 ABHD14AQ9BUJ0 271 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 OR51J1Q9H342 316 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 RCC2Q9P258 522 aaKnown RBP11.46□□□□□ -0.57
CHD8-211ENST00000556833 FBXO7Q9Y3I1 522 aa11.46□□□□□ -0.57
CHD8-211ENST00000556833 A0A1W2PN81 502 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 TRIM64CA6NLI5 447 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 LANCL1O43813 399 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 WBP4O75554 376 aaKnown RBP11.45□□□□□ -0.58
CHD8-211ENST00000556833 IGHV3-11P01762 117 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 SNRPBP14678 240 aaKnown RBP11.45□□□□□ -0.58
CHD8-211ENST00000556833 CHRNA7P36544 502 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 RAB9AP51151 201 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 ZNF137PP52743 207 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 MORN2Q502X0 79 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 TMPRSS11AQ6ZMR5 421 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 ODF3L1Q8IXM7 274 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 SMIM19Q96E16 107 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 C9orf16Q9BUW7 83 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 FGF20Q9NP95 211 aaPredicted RBP11.45□□□□□ -0.58
CHD8-211ENST00000556833 CKLFQ9UBR5 152 aa11.45□□□□□ -0.58
CHD8-211ENST00000556833 RYR2Q92736 4967 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 IGHV4OR15-8A0A075B7B6 117 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 A0A087WW49 117 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 TRBV5-5A0A0J9YX44 114 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 NBR2O15453 112 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 ZNF780AO75290 641 aaPredicted RBP11.44□□□□□ -0.58
CHD8-211ENST00000556833 BAG2O95816 211 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 MGMTP16455 207 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 CCDC58Q4VC31 144 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 FAM131AQ6UXB0 335 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 GLDNQ6ZMI3 551 aaPredicted RBP11.44□□□□□ -0.58
CHD8-211ENST00000556833 NABP2Q9BQ15 211 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 FBXL15Q9H469 300 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 SPACA1Q9HBV2 294 aa11.44□□□□□ -0.58
CHD8-211ENST00000556833 MRPS18AQ9NVS2 196 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms