RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 RBMXL3Q8N7X1 1067 aaKnown RBP5.28□□□□□ -1.56
TDP1-215ENST00000556498 BOLLQ8N9W6 283 aaKnown RBP5.28□□□□□ -1.56
TDP1-215ENST00000556498 OR2T33Q8NG76 320 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 LRRC15Q8TF66 581 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 NEUROG1Q92886 237 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 STARD4Q96DR4 205 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 PMCHL2Q9BQD1 86 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 NUDT22Q9BRQ3 303 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 TMEM70Q9BUB7 260 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 WDR13Q9H1Z4 485 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 SH3BGRL3Q9H299 93 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 IL23AQ9NPF7 189 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 PRTFDC1Q9NRG1 225 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 CA10Q9NS85 328 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 SIGLEC8Q9NYZ4 499 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 LHX3Q9UBR4 397 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 ABT1Q9ULW3 272 aaKnown RBP5.28□□□□□ -1.56
TDP1-215ENST00000556498 FZD1Q9UP38 647 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 HIGD1AQ9Y241 93 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 POLDIP2Q9Y2S7 368 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 HS3ST3B1Q9Y662 390 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 PARP4Q9UKK3 1724 aaKnown RBP5.28□□□□□ -1.56
TDP1-215ENST00000556498 MEGF6O75095 1541 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 SLIT2O94813 1529 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 LMO7Q8WWI1 1683 aa5.28□□□□□ -1.56
TDP1-215ENST00000556498 ECM29Q5VYK3 1845 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 COL16A1Q07092 1604 aaPredicted RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 A0A087X0K7 114 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 TRBV6-7A0A0A0MS04 114 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 A0A0A6YYD5 115 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 A0A1W2PP11 408 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 ZNF860A6NHJ4 632 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 MSGN1A6NI15 193 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 TMEM212A6NML5 194 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 ZNF850A8MQ14 1090 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 TMEM250H0YL14 139 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 H3BRM9 83 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 J3KTA2 159 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 ENSAO43768 121 aaKnown RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 PROSCO94903 275 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 PMS2P2O95744 297 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 OR2H2O95918 312 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 HLA-DPB1P04440 258 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 AMY1AP04745 511 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 HPNP05981 417 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 SCTP09683 121 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 VPREB1P12018 145 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 SRP14P37108 136 aaKnown RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 TNFRSF4P43489 277 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 POLR2JP52435 117 aaKnown RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 TMEM50BP56557 158 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 ZNF121P58317 390 aaPredicted RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 YPEL3P61236 119 aaPredicted RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 RAE1P78406 368 aaKnown RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 DGCR2P98153 550 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 COL10A1Q03692 680 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 PSG7Q13046 419 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 RPEL1Q2QD12 228 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 TREML2Q5T2D2 321 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 PMS2CLQ68D20 193 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 HBMQ6B0K9 141 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 TRIM40Q6P9F5 258 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 DHRS13Q6UX07 377 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 Q6ZS92 163 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 OR4N5Q8IXE1 308 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 ZNF611Q8N823 705 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 B3GALNT2Q8NCR0 500 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 VN1R2Q8NFZ6 395 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 OR51A4Q8NGJ6 313 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 VSTM2AQ8TAG5 236 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 Q8TCH9 128 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 RNF138Q8WVD3 245 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 OR5P2Q8WZ92 322 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 DDIT4LQ96D03 193 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 TMEM101Q96IK0 257 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 MCHR1Q99705 422 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 RASL11BQ9BPW5 248 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 TSSK6Q9BXA6 273 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 MRPL32Q9BYC8 188 aaKnown RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 OR2H1Q9GZK4 316 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 POMKQ9H5K3 350 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 IDI2-AS1Q9NZ38 188 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 IL36GQ9NZH8 169 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 FLRT3Q9NZU0 649 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 OR5V1Q9UGF6 321 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 PRNDQ9UKY0 176 aa5.27□□□□□ -1.57
TDP1-215ENST00000556498 ZNF443Q9Y2A4 671 aaPredicted RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 LSM2Q9Y333 95 aaKnown RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 COL14A1Q05707 1796 aaKnown RBP5.27□□□□□ -1.57
TDP1-215ENST00000556498 LRP5O75197 1615 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 ATAD5Q96QE3 1844 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 KIF13BQ9NQT8 1826 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 A0A1W2PPI3 338 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 C7orf71A4D174 169 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 OR51F1A6NGY5 319 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 LRRC3CA6NJW4 275 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 H0YJW9 148 aa5.26□□□□□ -1.57
TDP1-215ENST00000556498 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.26□□□□□ -1.57
TDP1-215ENST00000556498 WNT10BO00744 389 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms