RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 KCNIP1Q9NZI2 227 aa17.76■□□□□ 0.43
ACTN1-220ENST00000556433 MYL12BO14950 172 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 CD1AP06126 327 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 GNAO1P09471 354 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 F2RL1P55085 397 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 WNT4P56705 351 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 GPR50Q13585 617 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 CXorf66Q5JRM2 361 aaPredicted RBP17.75■□□□□ 0.43
ACTN1-220ENST00000556433 VAX1Q5SQQ9 334 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 STEAP3Q658P3 488 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 SIGIRRQ6IA17 410 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 UNQ9370/PRO34162Q6UXP9 181 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 AHSA2Q719I0 299 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 BPIFB6Q8NFQ5 453 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 TFAP2CQ92754 450 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 RAX2Q96IS3 184 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 Q96M66 194 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 DCLRE1BQ9H816 532 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 OR2S2Q9NQN1 319 aa17.75■□□□□ 0.43
ACTN1-220ENST00000556433 CCL24O00175 119 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 RRP9O43818 475 aaKnown RBP17.74■□□□□ 0.43
ACTN1-220ENST00000556433 SC5DO75845 299 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 RAB25P57735 213 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 RCN1Q15293 331 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 MORN2Q502X0 79 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 LCNL1Q6ZST4 164 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 NANOGP1Q8N7R0 232 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 NKAIN3Q8N8D7 197 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 FAM46BQ96A09 425 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 CYYR1Q96J86 154 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 HSPB9Q9BQS6 159 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 UQCC2Q9BRT2 126 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 PLCXD1Q9NUJ7 323 aa17.74■□□□□ 0.43
ACTN1-220ENST00000556433 LANCL1O43813 399 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 ELANEP08246 267 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 MAPK3P27361 379 aaPredicted RBP17.73■□□□□ 0.43
ACTN1-220ENST00000556433 SOX6P35712 828 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 FOXE3Q13461 319 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 C5orf24Q7Z6I8 188 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 FAM71E2Q8N5Q1 922 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 OR52L2PQ8NGH6 319 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 THRSPQ92748 146 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 MBNL3Q9NUK0 354 aaKnown RBP17.73■□□□□ 0.43
ACTN1-220ENST00000556433 GHRLQ9UBU3 117 aa17.73■□□□□ 0.43
ACTN1-220ENST00000556433 H0YHG0 523 aa17.72■□□□□ 0.43
ACTN1-220ENST00000556433 PDCD6O75340 191 aa17.72■□□□□ 0.43
ACTN1-220ENST00000556433 CDX1P47902 265 aaPredicted RBP17.72■□□□□ 0.43
ACTN1-220ENST00000556433 NKAPLQ5M9Q1 402 aa17.72■□□□□ 0.43
ACTN1-220ENST00000556433 FBLIM1Q8WUP2 373 aa17.72■□□□□ 0.43
ACTN1-220ENST00000556433 CST11Q9H112 138 aa17.72■□□□□ 0.43
ACTN1-220ENST00000556433 ERGIC3Q9Y282 383 aa17.72■□□□□ 0.43
ACTN1-220ENST00000556433 VDAC1P21796 283 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 LSAMPQ13449 338 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 GNMTQ14749 295 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 KIR2DS1Q14954 304 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 DEFB136Q30KP8 78 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 C11orf87Q6NUJ2 197 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 ZNF554Q86TJ5 538 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 OR8U1Q8NH10 309 aa17.71■□□□□ 0.43
ACTN1-220ENST00000556433 MRPL30Q8TCC3 161 aaKnown RBP17.71■□□□□ 0.43
ACTN1-220ENST00000556433 ZMAT5Q9UDW3 170 aaKnown RBP17.71■□□□□ 0.43
ACTN1-220ENST00000556433 PPP1CCP36873 323 aaKnown RBP17.7■□□□□ 0.42
ACTN1-220ENST00000556433 GP2P55259 537 aaKnown RBP17.7■□□□□ 0.42
ACTN1-220ENST00000556433 DGCR2P98153 550 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 CFHR3Q02985 330 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 CD69Q07108 199 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 INSL4Q14641 139 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 ACSM3Q53FZ2 586 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 RNF152Q8N8N0 203 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 NEDD4LQ96PU5 975 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 ABHD14AQ9BUJ0 271 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 FKBP14Q9NWM8 211 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 ZNF107Q9UII5 783 aaPredicted RBP17.7■□□□□ 0.42
ACTN1-220ENST00000556433 JPT1Q9UK76 154 aa17.7■□□□□ 0.42
ACTN1-220ENST00000556433 IGHG4P01861 327 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 IGF1P05019 195 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 UBBP0CG47 229 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 SLC2A2P11168 524 aaPredicted RBP17.69■□□□□ 0.42
ACTN1-220ENST00000556433 HTD2P86397 168 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 MMDQ15546 238 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 OGFRL1Q5TC84 451 aaPredicted RBP17.69■□□□□ 0.42
ACTN1-220ENST00000556433 MS4A15Q8N5U1 240 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 KCTD7Q96MP8 289 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 LRRC42Q9Y546 428 aa17.69■□□□□ 0.42
ACTN1-220ENST00000556433 RGS11O94810 467 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 OR5H8P0DN80 308 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 MYF6P23409 242 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 GABPB1Q06547 395 aaPredicted RBP17.68■□□□□ 0.42
ACTN1-220ENST00000556433 FAM27D1Q5T7N8 215 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 GLT8D1Q68CQ7 371 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 OR10K2Q6IF99 312 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 ODF3L1Q8IXM7 274 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 OR5M8Q8NGP6 311 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 GALMQ96C23 342 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 RITA1Q96K30 269 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 B9D2Q9BPU9 175 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 SULT4A1Q9BR01 284 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 FAAP24Q9BTP7 215 aa17.68■□□□□ 0.42
ACTN1-220ENST00000556433 MRPL20Q9BYC9 149 aaKnown RBP17.68■□□□□ 0.42
ACTN1-220ENST00000556433 YPEL1O60688 119 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms