RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RHOBP62745 196 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 CEACAM21Q3KPI0 293 aa12.98□□□□□ -0.33
ARHGEF40-207ENST00000556399 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 COLCA2A8K830 154 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 HRASP01112 189 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 SUB1P53999 127 aaKnown RBP eCLIP12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CT45A1Q5HYN5 189 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR1P1Q8NH06 330 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CT45A3Q8NHU0 189 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CA5BP1Q8WTZ4 195 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CISD1Q9NZ45 108 aaKnown RBP12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 TREM2Q9NZC2 230 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 NKX6-3A6NJ46 265 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 NPBWR2P48146 333 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 RPEL1Q2QD12 228 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 ALKBH6Q3KRA9 238 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 PCGF1Q9BSM1 259 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 TRBV6-7A0A0A0MS04 114 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 C10orf128Q5T292 105 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 R3HDM4Q96D70 268 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 BSCL2Q96G97 398 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 P2RX4Q99571 388 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 CHRNA10Q9GZZ6 450 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 FZR1Q9UM11 496 aa12.97□□□□□ -0.33
ARHGEF40-207ENST00000556399 PDE6DO43924 150 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 PLAURQ03405 335 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 SSPNQ14714 243 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 IZUMO4Q1ZYL8 232 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 RNF151Q2KHN1 245 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 ZNF506Q5JVG8 444 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 SLC25A45Q8N413 288 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 SLC24A4Q8NFF2 622 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 R4GN57 208 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 IGKV1-9A0A0C4DH69 117 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 TRGV5A0A0B4J1U4 118 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A10PA6NDY2 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A18PA6NE21 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A16PA6NEW6 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A20PA6NIJ5 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A8PA6NJQ4 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A7PA6NKC0 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A22PA8MWA6 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A12PA8MX19 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A5PA8MXJ8 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A23PA8MXZ1 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 HAND1O96004 215 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 IGHV3-13P01766 116 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 IGHV3-7P01780 117 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 CD5P06127 495 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A15PP0C7V4 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A13PP0C7W8 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A14PP0C7W9 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 FAM90A24PP0C7X0 464 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 OR10J1P30954 320 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 CNN1P51911 297 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 ERHP84090 104 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 SCCPDHQ8NBX0 429 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 ZPBPQ9BS86 351 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 RNF122Q9H9V4 155 aa12.96□□□□□ -0.33
ARHGEF40-207ENST00000556399 DYNLRB1Q9NP97 96 aa12.96□□□□□ -0.34
ARHGEF40-207ENST00000556399 MDC1Q14676 2089 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 UBE2CO00762 179 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 SRP19P09132 144 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 CHRNB4P30926 498 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 TAF15Q92804 592 aaKnown RBP eCLIP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 ACY3Q96HD9 319 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 POM121L2Q96KW2 1035 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR4C12Q96R67 309 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 MRPL13Q9BYD1 178 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 ZNF25P17030 456 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 AMTP48728 403 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 C3AR1Q16581 482 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR10S1Q8NGN2 331 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 ZNF319Q9P2F9 582 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 SLC45A2Q9UMX9 530 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 ARL2-SNX15V9GYD0 113 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 TCF20Q9UGU0 1960 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 MEOX1P50221 254 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 LRP11Q86VZ4 500 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 OR2Z1Q8NG97 314 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 TMEM54Q969K7 222 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 TCFL5Q9UL49 500 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 TRAV34A0A0B4J273 112 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 LOC102723971A0A1B0GUV8 181 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 SYNGR1O43759 233 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 LYZL6O75951 148 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 ADCYAP1P18509 176 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 SUPT4H1P63272 117 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 SRSF4Q08170 494 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 GAMTQ14353 236 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 SSMEM1Q8WWF3 244 aa12.95□□□□□ -0.34
ARHGEF40-207ENST00000556399 SCN8AQ9UQD0 1980 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms