RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 RIMS2Q9UQ26 1411 aa1.3□□□□□ -2.2
SCFD1-217ENST00000555953 ADAMTSL1Q8N6G6 1762 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 KMT2EQ8IZD2 1858 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 ZNF638Q14966 1978 aaKnown RBP1.29□□□□□ -2.2
SCFD1-217ENST00000555953 A8MWP6 167 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 G3V3Q6 166 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 H3BSA7 217 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 SLC25A20O43772 301 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 CTSGP08311 255 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 OR12D1P0DN82 309 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 PVALBP20472 110 aaPredicted RBP1.29□□□□□ -2.2
SCFD1-217ENST00000555953 PSMB6P28072 239 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 CRABP1P29762 137 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 CRATP43155 626 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 PSMD8P48556 350 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 OR8G1Q15617 311 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 SPIN4Q56A73 249 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 TIMM23BQ5SRD1 257 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 HENMT1Q5T8I9 393 aaKnown RBP1.29□□□□□ -2.2
SCFD1-217ENST00000555953 SPNS3Q6ZMD2 512 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 SCXQ7RTU7 201 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 C2orf73Q8N5S3 287 aaPredicted RBP1.29□□□□□ -2.2
SCFD1-217ENST00000555953 OR52E4Q8NGH9 312 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 OR11L1Q8NGX0 322 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 ZNRF2Q8NHG8 242 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 LMX1AQ8TE12 382 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 SMIM12Q96EX1 92 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 OR8B2Q96RD0 313 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 POTEKPQ9BYX7 375 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 GTSF1LQ9H1H1 148 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 MRPL16Q9NX20 251 aaKnown RBP1.29□□□□□ -2.2
SCFD1-217ENST00000555953 VPREB3Q9UKI3 123 aa1.29□□□□□ -2.2
SCFD1-217ENST00000555953 SAMHD1Q9Y3Z3 626 aaKnown RBP1.29□□□□□ -2.2
SCFD1-217ENST00000555953 FTCDNL1E5RQL4 147 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 F5H5T6 163 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 KLRC4-KLRK1H3BQV0 150 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 GOLGA8RI6L899 631 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 J3QRE1 110 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 TP53I11O14683 189 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 ADAP1O75689 374 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 CDK14O94921 469 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 ORM1P02763 201 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 F8A1P23610 371 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 GABRA3P34903 492 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 GABARAPL2P60520 117 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 TSPAN31Q12999 210 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 CLEC12BQ2HXU8 276 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 CENPWQ5EE01 88 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 FAM45BPQ6NSW5 357 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 NOXRED1Q6NXP6 359 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 EBLN2Q6P2I7 272 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 SCGB1D4Q6XE38 83 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 NATD1Q8N6N6 113 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 OR10D4PQ8NGN7 298 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 EBNA1BP2Q99848 306 aaKnown RBP1.28□□□□□ -2.2
SCFD1-217ENST00000555953 SLC19A3Q9BZV2 496 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 METTL9Q9H1A3 318 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 WDR54Q9H977 334 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 EURLQ9NYK6 297 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 FIS1Q9Y3D6 152 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 RAD50Q92878 1312 aa1.28□□□□□ -2.2
SCFD1-217ENST00000555953 ATG2BQ96BY7 2078 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 DOCK6Q96HP0 2047 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 OTOFQ9HC10 1997 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 ADAMTS7Q9UKP4 1686 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 PTPRJQ12913 1337 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 K7EQS6 105 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF73O43830 326 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 YEATS4O95619 227 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 OCMP0CE72 109 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 PET100P0DJ07 73 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 CFL1P23528 166 aaKnown RBP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 COILP38432 576 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 PSMD7P51665 324 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 AKR1C2P52895 323 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 PDK2Q15119 407 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 MAPK14Q16539 360 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 TRMT12Q53H54 448 aaKnown RBP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 SDIM1Q6ZPB5 146 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 IQCF2Q8IXL9 164 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 BLIDQ8IZY5 108 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 ZFAND2AQ8N6M9 145 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 LFNGQ8NES3 379 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 OR10P1Q8NGE3 313 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 OR51H1Q8NH63 302 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 OR2V1Q8NHB1 315 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 STOML3Q8TAV4 291 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 GPR119Q8TDV5 335 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 C20orf166-AS1Q96NR2 134 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 KLF6Q99612 283 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 MED18Q9BUE0 208 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF426Q9BUY5 554 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 WASHC3Q9Y3C0 194 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 OR51B4Q9Y5P0 310 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 SNX10Q9Y5X0 201 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 PUS1Q9Y606 427 aaKnown RBP eCLIP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 V9GYY5 206 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-217ENST00000555953 CACNA1GO43497 2377 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 MYO9BQ13459 2157 aa1.27□□□□□ -2.21
SCFD1-217ENST00000555953 THSD7AQ9UPZ6 1657 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms