RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MRPS14O60783 128 aaKnown RBP0.13□□□□□ -2.39
SNX6-204ENST00000555541 ATF1P18846 271 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 CCR7P32248 378 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 DEFA6Q01524 100 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 SLC38A11Q08AI6 406 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 PDGFRLQ15198 375 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 HIKESHIQ53FT3 197 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 PIP5KL1Q5T9C9 394 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 RESP18Q5W5W9 173 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 EBLN2Q6P2I7 272 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 ASCL4Q6XD76 172 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 DGAT2L6Q6ZPD8 337 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 OR8B12Q8NGG6 310 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 C11orf1Q9H5F2 150 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 C11orf49Q9H6J7 331 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 C22orf24Q9Y442 160 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 V9GYY9 64 aa0.13□□□□□ -2.39
SNX6-204ENST00000555541 PTPRBP23467 1997 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 TRAV41A0A0B4J266 112 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 PRMT5O14744 637 aaPredicted RBP0.12□□□□□ -2.39
SNX6-204ENST00000555541 ZW10O43264 779 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 GMDSO60547 372 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 PRDX1Q06830 199 aaKnown RBP0.12□□□□□ -2.39
SNX6-204ENST00000555541 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.12□□□□□ -2.39
SNX6-204ENST00000555541 ARHGAP18Q8N392 663 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 SPICQ8N5J4 248 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 ASB17Q8WXJ9 295 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 ZNF396Q96N95 335 aaPredicted RBP0.12□□□□□ -2.39
SNX6-204ENST00000555541 PRSS27Q9BQR3 290 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 UTP23Q9BRU9 249 aaKnown RBP0.12□□□□□ -2.39
SNX6-204ENST00000555541 FAAP24Q9BTP7 215 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 BLZF1Q9H2G9 400 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 VAPAQ9P0L0 249 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 STK38LQ9Y2H1 464 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 KLK5Q9Y337 293 aaPredicted RBP0.12□□□□□ -2.39
SNX6-204ENST00000555541 HEATR5BQ9P2D3 2071 aa0.12□□□□□ -2.39
SNX6-204ENST00000555541 F8W036 122 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 SPNP16150 400 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 TSPOP30536 169 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 SLC35A2P78381 396 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 STX4Q12846 297 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 PABPC1L2AQ5JQF8 200 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 LAMTOR1Q6IAA8 161 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 FGF13Q92913 245 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 GALMQ96C23 342 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 EBNA1BP2Q99848 306 aaKnown RBP0.11□□□□□ -2.39
SNX6-204ENST00000555541 C8orf4Q9NR00 106 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 IFNKQ9P0W0 207 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 RRP15Q9Y3B9 282 aaKnown RBP0.11□□□□□ -2.39
SNX6-204ENST00000555541 FAM215AQ9Y5M1 114 aa0.11□□□□□ -2.39
SNX6-204ENST00000555541 TRAV8-2A0A0B4J237 113 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 RFPL4AA6NLU0 287 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 C9J4A7 227 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 RFPL4AL1F8VTS6 287 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 ZNF737O75373 536 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 FBP1P09467 338 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 ESDP10768 282 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 GPX2P18283 190 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 TSPEAR-AS2P59090 65 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 FAM162BQ5T6X4 162 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 ZNF707Q96C28 371 aaPredicted RBP0.1□□□□□ -2.39
SNX6-204ENST00000555541 CHRAC1Q9NRG0 131 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 MED9Q9NWA0 146 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 FIS1Q9Y3D6 152 aa0.1□□□□□ -2.39
SNX6-204ENST00000555541 A0A1B0GTQ1 180 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 GRIFINA4D1Z8 144 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 B4DEV8 164 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 H3BSA7 217 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 ZNF728P0DKX0 622 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 PSMA1P25786 263 aaKnown RBP0.09□□□□□ -2.4
SNX6-204ENST00000555541 PPP1CCP36873 323 aaKnown RBP0.09□□□□□ -2.4
SNX6-204ENST00000555541 BCAP31P51572 246 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 GABARAPL2P60520 117 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 C1QTNF8P60827 252 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 HSP90B2PQ58FF3 399 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 OR8G5Q8NG78 346 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 OR4K17Q8NGC6 315 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 OR51L1Q8NGJ5 315 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 DTD1Q8TEA8 209 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 ZMYND19Q96E35 227 aaPredicted RBP0.09□□□□□ -2.4
SNX6-204ENST00000555541 FBXL15Q9H469 300 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 ALG5Q9Y673 324 aa0.09□□□□□ -2.4
SNX6-204ENST00000555541 C8orf87E5RJ46 101 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 BOLA2-SMG1P6H3BVE0 249 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 PSMD11O00231 422 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 ENSAO43768 121 aaKnown RBP0.08□□□□□ -2.4
SNX6-204ENST00000555541 CRHBPP24387 322 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 AKR1C3P42330 323 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 DSTNP60981 165 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 GLO1Q04760 184 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 SPAG1Q07617 926 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 CDK5R1Q15078 307 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 PDK2Q15119 407 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 SURF2Q15527 256 aaPredicted RBP0.08□□□□□ -2.4
SNX6-204ENST00000555541 MAPK14Q16539 360 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 ACTL10Q5JWF8 245 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 FAM183BPQ6ZVS7 135 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 OR4P4Q8NGL7 312 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 OR6N2Q8NGY6 317 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 OR5J2Q8NH18 312 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms