RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 MBNL3Q9NUK0 354 aaKnown RBP9.93□□□□□ -0.82
TRAPPC6B-205ENST00000555269 A0A1W2PPI3 338 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 FOXI3A8MTJ6 420 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 OOSP1A8MZH6 123 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 H3BUI4 141 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 PDCD5O14737 125 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 SLC2A2P11168 524 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 MNDAP41218 407 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 PSMD7P51665 324 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 GNMTQ14749 295 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 TMEM95Q3KNT9 176 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 PRR31Q5SQ13 230 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 C6orf183Q5T699 404 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 MOB3BQ86TA1 216 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 Q8N2B8 174 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 LINC00311Q8N616 119 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 ZNF439Q8NDP4 499 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 OR56B4Q8NH76 319 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 CFHR4Q92496 578 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 RBM14Q96PK6 669 aaKnown RBP9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 URM1Q9BTM9 101 aaKnown RBP9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 PECRQ9BY49 303 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 PRSS22Q9GZN4 317 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 OR51E2Q9H255 320 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 RNF167Q9H6Y7 350 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 RANBP3Q9H6Z4 567 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 OR2S2Q9NQN1 319 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 TXNL4BQ9NX01 149 aaKnown RBP9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 KCNIP1Q9NZI2 227 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 GNG12Q9UBI6 72 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 STEAP1Q9UHE8 339 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 AK3Q9UIJ7 227 aa9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 AMMECR1Q9Y4X0 333 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC6B-205ENST00000555269 IGHV3-72A0A0B4J1Y9 119 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 IFITM5A6NNB3 132 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 GAPDHP04406 335 aaKnown RBP9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 AMY1AP04745 511 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 AMY2AP04746 511 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 SNRNP70P08621 437 aaKnown RBP9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 RAB3BP20337 219 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 MYL9P24844 172 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 PPP1CCP36873 323 aaKnown RBP9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 NEDD8Q15843 81 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 MORN2Q502X0 79 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 PLAC9Q5JTB6 97 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 CCDC144NLQ6NUI1 221 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 Q6ZTK2 550 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 THNSL2Q86YJ6 484 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 KLHDC1Q8N7A1 406 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 SETD6Q8TBK2 473 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 FCGR1BQ92637 280 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 ARHGAP5-AS1Q96IT6 56 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 SLC25A33Q9BSK2 321 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 CHMP1AQ9HD42 196 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 RAB22AQ9UL26 194 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 STUB1Q9UNE7 303 aa9.91□□□□□ -0.82
TRAPPC6B-205ENST00000555269 VWFP04275 2813 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 IGHV1-3A0A0C4DH29 117 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 ZNF736B4DX44 427 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 HSD17B6O14756 317 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 OR2F2O95006 317 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 NAPSAO96009 420 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 CLEC2LP0C7M8 214 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 FAM106CPP0CH98 169 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 GALP22466 123 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 FGF9P31371 208 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 RAB7AP51149 207 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 ARHGDIBP52566 201 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 HES1Q14469 280 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 MOGAT2Q3SYC2 334 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 ABCA11PQ4W5N1 156 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 ZNF880Q6PDB4 577 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 TRAT1Q6PIZ9 186 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 ST6GALNAC6Q969X2 333 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 LIN7BQ9HAP6 207 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 HSF4Q9ULV5 492 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 SSR3Q9UNL2 185 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 KCNK7Q9Y2U2 307 aa9.9□□□□□ -0.82
TRAPPC6B-205ENST00000555269 MGAM2Q2M2H8 2515 aa9.9□□□□□ -0.83
TRAPPC6B-205ENST00000555269 IGKV1D-33P01593 117 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 IGKV1-33P01594 117 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 LPLP06858 475 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 CD28P10747 220 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 CD36P16671 472 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 GADD45AP24522 165 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 ZNF816Q0VGE8 651 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 HERPUD1Q15011 391 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 HMGN3Q15651 99 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 KCTD21Q4G0X4 260 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 ARSJQ5FYB0 599 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 OR8H3Q8N146 312 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 LYG1Q8N1E2 194 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 RTN4IP1Q8WWV3 396 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 GALMQ96C23 342 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 CHCHD6Q9BRQ6 235 aa9.89□□□□□ -0.83
TRAPPC6B-205ENST00000555269 RAB9BQ9NP90 201 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms