RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 CADM4Q8NFZ8 388 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 OR5R1Q8NH85 324 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 RAB24Q969Q5 203 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 SAMD10Q9BYL1 202 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 NCOR1O75376 2440 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 A0A087WWC5 75 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 TRAV38-1A0A0B4J264 116 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 EPOPA6NHQ4 379 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 SLC22A20A6NK97 555 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 RPL36A-HNRNPH2H7BZ11 118 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 SLC17A3O00476 420 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 RPLP1P05386 114 aaKnown RBP7.61□□□□□ -1.19
SYNE2-217ENST00000555022 SERPINA7P05543 415 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 PRB4P10163 310 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-217ENST00000555022 PMCHP20382 165 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 GALNSP34059 522 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 CD81P60033 236 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 GRB2P62993 217 aaKnown RBP7.61□□□□□ -1.19
SYNE2-217ENST00000555022 HIST1H3AP68431 136 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 TFF3Q07654 80 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 SHBQ15464 509 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 IQCJQ1A5X6 159 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 ZNF114Q8NC26 417 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 OR5P3Q8WZ94 311 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 ZNF501Q96CX3 271 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-217ENST00000555022 SIGLEC12Q96PQ1 595 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 CDCA3Q99618 268 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-217ENST00000555022 GVINP1Q7Z2Y8 2422 aa7.61□□□□□ -1.19
SYNE2-217ENST00000555022 IGKV3D-11A0A0A0MRZ8 115 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 A0A1B0GWJ7 208 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 PDCD6O75340 191 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 CD38P28907 300 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 MMDQ15546 238 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ADPRHL1Q8NDY3 354 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 SPTSSAQ969W0 71 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 SPIN2AQ99865 258 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 SPIN2BQ9BPZ2 258 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 MOB1AQ9H8S9 216 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 MANBALQ9NQG1 85 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 MKRN2OSH3BPM6 223 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 DLEU1O43261 78 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 DHHO43323 396 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ZIC3O60481 467 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 LILRA1O75019 489 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 NAPSAO96009 420 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ATP5G3P48201 142 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 CFHR1Q03591 330 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ACSM6Q6P461 480 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 C20orf204Q6ZNR8 217 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 HAPLN4Q86UW8 402 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 OR10J5Q8NHC4 309 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 NOL4LQ96MY1 436 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-217ENST00000555022 SRD5A3Q9H8P0 318 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ZDHHC11Q9H8X9 412 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 DNAJC4Q9NNZ3 241 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 FBLN5Q9UBX5 448 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ATP23Q9Y6H3 246 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ARFGEF3Q5TH69 2177 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 SYNGR1O43759 233 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 NTF3P20783 257 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 IL3RAP26951 378 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 EDDM3BP56851 147 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ARF1P84077 181 aaKnown RBP7.6□□□□□ -1.19
SYNE2-217ENST00000555022 BAGE3Q86Y29 109 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 BAGE2Q86Y30 109 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 RPP25LQ8N5L8 163 aaKnown RBP7.6□□□□□ -1.19
SYNE2-217ENST00000555022 ST8SIA1Q92185 356 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 WNT10AQ9GZT5 417 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 CDH20Q9HBT6 801 aa7.6□□□□□ -1.19
SYNE2-217ENST00000555022 IGKV1-6A0A0C4DH72 117 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 CNN1P51911 297 aaKnown RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 MEF2BQ02080 365 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 KIAA0895LQ68EN5 471 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 ZDHHC16Q969W1 377 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 OXGR1Q96P68 337 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 GABRG3Q99928 467 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 TM2D1Q9BX74 207 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 DEFB126Q9BYW3 111 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 C8orf33Q9H7E9 229 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 ZNF703Q9H7S9 590 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 NAT8Q9UHE5 227 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 VAX2Q9UIW0 290 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 MUC22E2RYF6 1773 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 CLEC18AA5D8T8 446 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 NDUFB4O95168 129 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 PFN1P07737 140 aaKnown RBP7.59□□□□□ -1.19
SYNE2-217ENST00000555022 SFTPCP11686 197 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 MAS1LP35410 378 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 SLC38A11Q08AI6 406 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 FFAR4Q5NUL3 377 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 CLEC18CQ8NCF0 446 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 OR56B2PQ8NGI1 322 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 PP6455Q8WZ26 134 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 ST6GALNAC6Q969X2 333 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 LPAR2Q9HBW0 351 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 RNF114Q9Y508 228 aa7.59□□□□□ -1.19
SYNE2-217ENST00000555022 ZFHX4Q86UP3 3567 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms