RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 VN1R17PQ8TDU5 208 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 hCG_38984A0A1B0GV85 526 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 IL4P05112 153 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 ERVFRD-1P60508 538 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 COL10A1Q03692 680 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM95Q3KNT9 176 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 SLC25A42Q86VD7 318 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 FAM24BQ8N5W8 94 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CXorf1O96002 111 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 NAT2P11245 290 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 SLC25A1P53007 311 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 PET117Q6UWS5 81 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 OVCH2Q7RTZ1 564 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CENPVQ7Z7K6 275 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 SYS1Q8N2H4 156 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 NT5CQ8TCD5 201 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 LPAR3Q9UBY5 353 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 OR2W1Q9Y3N9 320 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 NTN1O95631 604 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF680Q8NEM1 530 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 PLXNB2O15031 1838 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CDIPTO14735 213 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 SFT2D2O95562 160 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 REG1AP05451 166 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 TRA2AQ13595 282 aaKnown RBP eCLIP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 RAB32Q13637 225 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 FAM106AQ4KMX7 169 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 DLEU7Q6UYE1 221 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 GAPTQ8N292 157 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 MUC20Q8N307 709 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 ZDHHC22Q8N966 263 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 PRSS50Q9UI38 385 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 K7N7A8 449 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 FCGR2BP31994 310 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 RBM11P57052 281 aaKnown RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 POLR2GP62487 172 aaKnown RBP eCLIP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 RPL31P62899 125 aaKnown RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 HYAL1Q12794 435 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 FAM216AQ8WUB2 273 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 ITLN2Q8WWU7 325 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CDCA4Q9BXL8 241 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 C20orf27Q9GZN8 174 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 HSPB7Q9UBY9 170 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 IGHV5-51A0A0C4DH38 117 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 C9orf170A2RU37 121 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 C9JCJ5 164 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CKS2P33552 79 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 DHRS2Q13268 280 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 SLC25A19Q9HC21 320 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 SF3B6Q9Y3B4 125 aaKnown RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 C7orf71A4D174 169 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 ZAR1LA6NP61 321 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CELA2BP08218 269 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 DAOP14920 347 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 TSPOP30536 169 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 HINT1P49773 126 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 SH2D5Q6ZV89 423 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 WDFY1Q8IWB7 410 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 GATA6Q92908 595 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 KNDC1Q76NI1 1749 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 IGHV3-49A0A0A0MS15 119 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ZBTB42B2RXF5 422 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 HLA-DRB3P79483 266 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 TEX30Q5JUR7 227 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 MRM1Q6IN84 353 aaKnown RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 JMJD6Q6NYC1 403 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 EID2BQ96D98 161 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 WNT5BQ9H1J7 359 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 SPNS1Q9H2V7 528 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 TRAV1-2A0A0B4J238 106 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CEACAM5P06731 702 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 GLULP15104 373 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 MALP21145 153 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ANOS1P23352 680 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 EPHA8P29322 1005 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 GZMKP49863 264 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 OR5AU1Q8NGC0 362 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 MVB12AQ96EY5 273 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 A0A0A6YYD5 115 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 A0A1W2PS18 150 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 B4GALNT1Q00973 533 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 PWWP2BQ6NUJ5 590 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 ZG16BQ96DA0 208 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CCL13Q99616 98 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CDX2Q99626 313 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 TRAV12-3A0A0B4J271 114 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CDS2O95674 445 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 PNLIPP16233 465 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 DLK1P80370 383 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 YAE1D1Q9NRH1 226 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 NKX2-6A6NCS4 301 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 H3BTX0 84 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 CLDN34H7C241 214 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 TGFAP01135 160 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 TDGF1P13385 188 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 HIST1H1AQ02539 215 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-216ENST00000555002 PIGYQ3MUY2 71 aa6.04□□□□□ -1.44
SYNE2-216ENST00000555002 PHLDA1Q8WV24 401 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms