RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 TMEM229BQ8NBD8 167 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 OR11H6Q8NGC7 330 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 OR52L2PQ8NGH6 319 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 OR10J5Q8NHC4 309 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 UBALD1Q8TB05 177 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 NANPQ8TBE9 248 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 IL1F10Q8WWZ1 152 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 SNAPC3Q92966 411 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 SRRQ9GZT4 340 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 SIRT7Q9NRC8 400 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 GFOD1Q9NXC2 390 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 JPT1Q9UK76 154 aa8.33□□□□□ -1.08
SYNE2-215ENST00000554997 ZNF469Q96JG9 3925 aaPredicted RBP8.33□□□□□ -1.08
SYNE2-215ENST00000554997 RNASEK-C17orf49H0YIS7 233 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 FCER2P06734 321 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 CSF1P09603 554 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 HLA-DMAP28067 261 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 CD40LGP29965 261 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 OR3A3P47888 321 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 ZNF134P52741 427 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 PPP5CP53041 499 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 TAS2R46P59540 309 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 ARPC4P59998 168 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 ZNF846Q147U1 533 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 CDK10Q15131 360 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 LTC4SQ16873 150 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 FAM120AOSQ5T036 256 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 DHRS11Q6UWP2 260 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 ZNF782Q6ZMW2 699 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-215ENST00000554997 OVCH2Q7RTZ1 564 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 OR9G1Q8NH87 305 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 ZNF596Q8TC21 504 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 GIMAP1Q8WWP7 306 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 LHX4Q969G2 390 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 SDHCQ99643 169 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-215ENST00000554997 CABLES2Q9BTV7 478 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 SUCNR1Q9BXA5 334 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 CLEC7AQ9BXN2 247 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 WDR12Q9GZL7 423 aaKnown RBP8.32□□□□□ -1.08
SYNE2-215ENST00000554997 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-215ENST00000554997 NECAP2Q9NVZ3 263 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 SLC23A1Q9UHI7 598 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 PSG11Q9UQ72 335 aa8.32□□□□□ -1.08
SYNE2-215ENST00000554997 CR1P17927 2039 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 IGHV2-26A0A0B4J1V2 119 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 IGHV3-43A0A0B4J1X8 118 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 ANKRD20A5PA0PJZ0 165 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 ZNF736B4DX44 427 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 J3QR06 171 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 TOR1AO14656 332 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 BET1O15155 118 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 HSPA12AO43301 675 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 LANCL1O43813 399 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 IGLV1-47P01700 117 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 PMP2P02689 132 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 CD74P04233 296 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 CD3DP04234 171 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 OR5H8P0DN80 308 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 IGHV3-43DP0DP04 118 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 TBPP20226 339 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 PPP1CCP36873 323 aaKnown RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 RFX2P48378 723 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 DLX1P56177 255 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 TAS2R19P59542 299 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 PRB3Q04118 309 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 DYRK1AQ13627 763 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 BAK1Q16611 211 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 ACTBL2Q562R1 376 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 RNASE12Q5GAN4 147 aaKnown RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 CT45A1Q5HYN5 189 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 KLF17Q5JT82 389 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 UTF1Q5T230 341 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 FAM53AQ6NSI3 398 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 PNKDQ8N490 385 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 LINC00311Q8N616 119 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 BEND2Q8NDZ0 799 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 OR5H2Q8NGV7 314 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 CT45A3Q8NHU0 189 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 LEAP2Q969E1 77 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 GHITMQ9H3K2 345 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 RDH8Q9NYR8 311 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 OR1A1Q9P1Q5 309 aa8.31□□□□□ -1.08
SYNE2-215ENST00000554997 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
SYNE2-215ENST00000554997 MTORP42345 2549 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 IGHV1-69DA0A0B4J2H0 117 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 FSHBP01225 129 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 IGHV1-69P01742 117 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 IGHV3-7P01780 117 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 FCGR2CP31995 323 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 HRH1P35367 487 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 AP3S2P59780 193 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 GNMTQ14749 295 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 MIDNQ504T8 468 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 VAX1Q5SQQ9 334 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 GPR157Q5UAW9 335 aa8.3□□□□□ -1.08
SYNE2-215ENST00000554997 ZNF626Q68DY1 528 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms