RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 NRXN3Q9Y4C0 1643 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 TOPAZ1Q8N9V7 1692 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 ASS1P00966 412 aaKnown RBP3.12□□□□□ -1.91
PSEN1-211ENST00000554995 RCVRNP35243 200 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 ACTR1BP42025 376 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 MRPL2Q5T653 305 aaKnown RBP3.12□□□□□ -1.91
PSEN1-211ENST00000554995 ELP2Q6IA86 826 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 DRAM2Q6UX65 266 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 TMEM144Q7Z5S9 345 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 HMGN2P46Q86SG4 172 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 V9GYY5 206 aaPredicted RBP3.12□□□□□ -1.91
PSEN1-211ENST00000554995 SLIT1O75093 1534 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 TULP4Q9NRJ4 1543 aa3.12□□□□□ -1.91
PSEN1-211ENST00000554995 TNRC18O15417 2968 aaPredicted RBP3.12□□□□□ -1.91
PSEN1-211ENST00000554995 USP54Q70EL1 1684 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 ATP7BP35670 1465 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 NALCNQ8IZF0 1738 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 TMEM250H0YL14 139 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 RBBP9O75884 186 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 KCNK2O95069 426 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 HLA-AP01891 365 aaKnown RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 CNTFRP26992 372 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 COILP38432 576 aaPredicted RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 PMELP40967 661 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 TBC1D28Q2M2D7 210 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 KPRPQ5T749 579 aaPredicted RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 TTC33Q6PID6 262 aaPredicted RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 CASP12Q6UXS9 341 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 H1FOOQ8IZA3 346 aaPredicted RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 DTD1Q8TEA8 209 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 RBPMSQ93062 196 aaKnown RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 CLDN23Q96B33 292 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 RBP7Q96R05 134 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 INIPQ9NRY2 104 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 PLEKHJ1Q9NW61 149 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 DOCK8Q8NF50 2099 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 MAP2P11137 1827 aaKnown RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 POLR3AO14802 1390 aaPredicted RBP3.11□□□□□ -1.91
PSEN1-211ENST00000554995 CABIN1Q9Y6J0 2220 aa3.11□□□□□ -1.91
PSEN1-211ENST00000554995 TECPR2O15040 1411 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 WDR90Q96KV7 1748 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 TUBGCP6Q96RT7 1819 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 IGLV2-18A0A075B6J9 118 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 IGHV3-43A0A0B4J1X8 118 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 IGLL5B9A064 214 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 HPGDSO60760 199 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 HIST1H1CP16403 213 aaKnown RBP3.1□□□□□ -1.91
PSEN1-211ENST00000554995 HSPA13P48723 471 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 GDI2P50395 445 aaKnown RBP3.1□□□□□ -1.91
PSEN1-211ENST00000554995 MP68P56378 58 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 C4orf26Q17RF5 130 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 DNAL1Q4LDG9 190 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 MTERF4Q7Z6M4 381 aaKnown RBP3.1□□□□□ -1.91
PSEN1-211ENST00000554995 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 RIBC1Q8N443 379 aaPredicted RBP3.1□□□□□ -1.91
PSEN1-211ENST00000554995 OR11L1Q8NGX0 322 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 STOML3Q8TAV4 291 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 PLA2G12AQ9BZM1 189 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 CHST5Q9GZS9 411 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 UBAP1Q9NZ09 502 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 ANKRD36BQ8N2N9 1353 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 ABCC11Q96J66 1382 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.1□□□□□ -1.91
PSEN1-211ENST00000554995 FMN2Q9NZ56 1722 aa3.1□□□□□ -1.91
PSEN1-211ENST00000554995 YTHDC2Q9H6S0 1430 aaKnown RBP3.1□□□□□ -1.91
PSEN1-211ENST00000554995 NUP214P35658 2090 aaPredicted RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 DOCK9Q9BZ29 2069 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 IGHV1-45A0A0A0MS14 117 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 CCRL2O00421 344 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 SOX14O95416 240 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 PTHLHP12272 177 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 HLA-DMAP28067 261 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 S100A2P29034 98 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 CDC34P49427 236 aaPredicted RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 RAB2AP61019 212 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 RBX1P62877 108 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 SKP2Q13309 424 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 MED21Q13503 144 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 EIF4EBP2Q13542 120 aaPredicted RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 FAM53BQ14153 422 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 ENDOGQ14249 297 aaKnown RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 PAFAH1B3Q15102 231 aaKnown RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 CDKL4Q5MAI5 379 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 DNLZQ5SXM8 178 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 LAIR2Q6ISS4 152 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 SGPP2Q8IWX5 399 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 ZFP82Q8N141 532 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 TMEM251Q8N6I4 163 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 MAL2Q969L2 176 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 YIPF5Q969M3 257 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 SMIM12Q96EX1 92 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 SEC22CQ9BRL7 303 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 ZNF2Q9BSG1 426 aaPredicted RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 RSPO3Q9BXY4 272 aaPredicted RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 NSRP1Q9H0G5 558 aaKnown RBP3.09□□□□□ -1.91
PSEN1-211ENST00000554995 METTL9Q9H1A3 318 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 VSIRQ9H7M9 311 aa3.09□□□□□ -1.91
PSEN1-211ENST00000554995 XRN1Q8IZH2 1706 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms