RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 OR1J1Q8NGS3 322 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 NARS2Q96I59 477 aaKnown RBP14.63□□□□□ -0.07
SHOX-204ENST00000554971 BCL2L14Q9BZR8 327 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 ARV1Q9H2C2 271 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 PARP11Q9NR21 331 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 CREBBPQ92793 2442 aa14.63□□□□□ -0.07
SHOX-204ENST00000554971 DUXBA0A1W2PPF3 345 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 CYSRT1A8MQ03 144 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 CDS2O95674 445 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 NAPSAO96009 420 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 PPYP01298 95 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 TK1P04183 234 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 OR4A8P0C604 315 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 APOBEC3AP31941 199 aaPredicted RBP14.62□□□□□ -0.07
SHOX-204ENST00000554971 P2RY1P47900 373 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 PPP1CBP62140 327 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 MUC15Q8N387 334 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 SLC25A40Q8TBP6 338 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 GLYATL2Q8WU03 294 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 ABHD14BQ96IU4 210 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 MRPL37Q9BZE1 423 aaKnown RBP14.62□□□□□ -0.07
SHOX-204ENST00000554971 MS4A7Q9GZW8 240 aaPredicted RBP14.62□□□□□ -0.07
SHOX-204ENST00000554971 Q9N2K0 584 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 FLNAP21333 2647 aaKnown RBP14.62□□□□□ -0.07
SHOX-204ENST00000554971 TRBV6-6A0A0A6YYG2 114 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 BORCS7-ASMTA0A0B4J1R7 106 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 OR5B21A6NL26 309 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 TRAPPC2LH3BP13 241 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 GPR137BO60478 399 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 MPV17P39210 176 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 RPL7L1Q6DKI1 246 aaKnown RBP14.62□□□□□ -0.07
SHOX-204ENST00000554971 DTX2Q86UW9 622 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 LDLRAD3Q86YD5 345 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 LURAP1Q96LR2 239 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 TSNAXQ99598 290 aaKnown RBP14.62□□□□□ -0.07
SHOX-204ENST00000554971 SEC11CQ9BY50 192 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 OR2S2Q9NQN1 319 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 ZNF581Q9P0T4 197 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 LAMP3Q9UQV4 416 aa14.62□□□□□ -0.07
SHOX-204ENST00000554971 DNASE2O00115 360 aaPredicted RBP14.61□□□□□ -0.07
SHOX-204ENST00000554971 MPPED1O15442 326 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 ST8SIA3O43173 380 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 MBPP02686 304 aaPredicted RBP14.61□□□□□ -0.07
SHOX-204ENST00000554971 ATF4P18848 351 aaPredicted RBP14.61□□□□□ -0.07
SHOX-204ENST00000554971 AADACP22760 399 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 HAAOP46952 286 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 FABP6P51161 128 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 CAV2P51636 162 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 PRSS12P56730 875 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 TMEM33P57088 247 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 FXYD4P59646 89 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 SWI5Q1ZZU3 235 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 C11orf71Q6IPW1 123 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 ZNF573Q86YE8 665 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 COMMD1Q8N668 190 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 KLF14Q8TD94 323 aaPredicted RBP14.61□□□□□ -0.07
SHOX-204ENST00000554971 HPSE2Q8WWQ2 592 aa14.61□□□□□ -0.07
SHOX-204ENST00000554971 PRRC2AP48634 2157 aaKnown RBP14.61□□□□□ -0.07
SHOX-204ENST00000554971 IGLV3-9A0A075B6K5 115 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 ANKRD30BLA7E2S9 258 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 SEC11BP0C7V7 166 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 NPBWR2P48146 333 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 SPIN2AQ99865 258 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 MICU1Q9BPX6 476 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 SPIN2BQ9BPZ2 258 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 PKIBQ9C010 78 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 IFT22Q9H7X7 185 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 CD300LBA8K4G0 201 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 ZNF732B4DXR9 585 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 BCL3P20749 454 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 KCNJ3P48549 501 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 F2RL1P55085 397 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 RPS23P62266 143 aaKnown RBP14.6□□□□□ -0.07
SHOX-204ENST00000554971 ALKBH6Q3KRA9 238 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 BRICD5Q6PL45 260 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 C20orf204Q6ZNR8 217 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 LYPD6BQ8NI32 183 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 OR5P3Q8WZ94 311 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 TMEM56Q96MV1 263 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 FAM212BQ9NTI7 297 aaPredicted RBP14.6□□□□□ -0.07
SHOX-204ENST00000554971 FBXL17Q9UF56 701 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 LSM5Q9Y4Y9 91 aaKnown RBP14.6□□□□□ -0.07
SHOX-204ENST00000554971 TMEM56-RWDD3S4R434 201 aa14.6□□□□□ -0.07
SHOX-204ENST00000554971 C3orf85A0A1B0GTC6 90 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 TRDCB7Z8K6 153 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 RAB5CP51148 216 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 GPM6AP51674 278 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 GNG3P63215 75 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 IL24Q13007 206 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 PSG7Q13046 419 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 EFNB3Q15768 340 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 SP6Q3SY56 376 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 PHLDA2Q53GA4 152 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 MBNL2Q5VZF2 373 aaKnown RBP14.59□□□□□ -0.07
SHOX-204ENST00000554971 FAM122CQ6P4D5 195 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 ATRAIDQ6UW56 229 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 LYZL2Q7Z4W2 148 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 FOXRED2Q8IWF2 684 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 DYRK2Q92630 601 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 TMEM222Q9H0R3 208 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms