RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 REG1BP48304 166 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 GNG10P50151 68 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 SNU13P55769 128 aaKnown RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 MTCP1P56278 107 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 RAB40BQ12829 278 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 PDZK1IP1Q13113 114 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 LTC4SQ16873 150 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 MICAQ29983 383 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 ZIK1Q3SY52 487 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 HSP90B2PQ58FF3 399 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 Q6P435 159 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 ZNF322Q6U7Q0 402 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 CPOQ8IVL8 374 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 LINC00311Q8N616 119 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 IQCF1Q8N6M8 205 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 YIPF7Q8N8F6 280 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 C8orf31Q8N9H6 132 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 OR51T1Q8NGJ9 327 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 OR13A1Q8NGR1 328 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 C10orf35Q96D05 121 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 NSMCE2Q96MF7 247 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 APOL4Q9BPW4 351 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 FAM110AQ9BQ89 295 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 CHST5Q9GZS9 411 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 COMMD4Q9H0A8 199 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 ALX4Q9H161 411 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 RETNQ9HD89 108 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 SPAG4Q9NPE6 437 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 GTF2A1LQ9UNN4 478 aa3.66□□□□□ -1.82
ATXN3-229ENST00000554672 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-229ENST00000554672 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
ATXN3-229ENST00000554672 CXorf65A6NEN9 183 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 PRR32B1ATL7 298 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 ZNF736B4DX44 427 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-229ENST00000554672 TXNL1O43396 289 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 RGS11O94810 467 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 KDM4BO94953 1096 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 BRI3O95415 125 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 HLA-DRB1P01911 266 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 ATF1P18846 271 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 GZMHP20718 246 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 ZP3P21754 424 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 SLC2A5P22732 501 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 VHLP40337 213 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 GLP1RP43220 463 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 MAGEA2P43356 314 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 TMEM267Q0VDI3 215 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-229ENST00000554672 PPP1R8Q12972 351 aaKnown RBP3.65□□□□□ -1.83
ATXN3-229ENST00000554672 APOFQ13790 326 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 GINS1Q14691 196 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 ATXN7L3Q14CW9 347 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-229ENST00000554672 TATDN3Q17R31 274 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 LGALS9CQ6DKI2 356 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 LIN54Q6MZP7 749 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 FAHD1Q6P587 224 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 HAPLN4Q86UW8 402 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 RDH10Q8IZV5 341 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 ARHGAP24Q8N264 748 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 BBS1Q8NFJ9 593 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 OR52M1Q8NGK5 317 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 RTN4IP1Q8WWV3 396 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-229ENST00000554672 PP6455Q8WZ26 134 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 TMEM106AQ96A25 262 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 MBOAT4Q96T53 435 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 TEX12Q9BXU0 123 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 PPIL3Q9H2H8 161 aaKnown RBP3.65□□□□□ -1.83
ATXN3-229ENST00000554672 SLC25A19Q9HC21 320 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 RANGRFQ9HD47 186 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-229ENST00000554672 KIF25Q9UIL4 384 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
ATXN3-229ENST00000554672 IGHV7-81A0A0B4J1V7 117 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 IGKV1-9A0A0C4DH69 117 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 IGKV1-12A0A0C4DH73 117 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 ATP6V0E1O15342 81 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 MAGEB3O15480 346 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 MAGEB4O15481 346 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-229ENST00000554672 DEDDO75618 318 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 TPPPO94811 219 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 IGKV1D-12P01611 117 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 IGHV3-11P01762 117 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 MRPL3P09001 348 aaKnown RBP3.64□□□□□ -1.83
ATXN3-229ENST00000554672 NPSP0C0P6 89 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 OCM2P0CE71 109 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 OCMP0CE72 109 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-229ENST00000554672 SLC2A2P11168 524 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-229ENST00000554672 HOXB6P17509 224 aaKnown RBP3.64□□□□□ -1.83
ATXN3-229ENST00000554672 CD40LGP29965 261 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 BLVRBP30043 206 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-229ENST00000554672 KCNJ3P48549 501 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 MNAT1P51948 309 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 UCP3P55916 312 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 CXCR4P61073 352 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 PAX5Q02548 391 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 KLF5Q13887 457 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-229ENST00000554672 GK3PQ14409 553 aa3.64□□□□□ -1.83
ATXN3-229ENST00000554672 CDK5R1Q15078 307 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms